lineage | Count |
---|---|
8 | |
lineage1.1.3.2 | 1 |
lineage2.2.1 | 7 |
lineage3 | 4 |
lineage4.8 | 1 |
lineage4.1.2.1 | 2 |
lineage4.4.1.1;lineage4.1.2.1 | 1 |
lineage4 | 11 |
lineage4.9 | 39 |
lineage4.9;lineage2.2 | 1 |
lineage2.2 | 4 |
lineage2 | 1 |
lineage4.4.1.1.1 | 1 |
La1.7.1 | 1 |
lineage4.1 | 1 |
lineage2.1 | 1 |
lineage4.5 | 1 |
La1.8.1 | 1 |
lineage4.3.2.1 | 1 |
lineage4.8.1 | 1 |
La1 | 2 |
La1.2 | 1 |
lineage2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 92 |
ID | Drug resistance | Lineage | Country iso2 | ERR9119669 | HR-TB | None | ERR7821126 | Sensitive | lineage1.1.3.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049672 | Other | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1140736 | RR-TB | None | SRR1062928 | RR-TB | lineage4 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173740 | Other | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR3675510 | Other | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR2446566 | Other | lineage4.1 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4816470 | Other | lineage3 | None | ERR4816548 | MDR-TB | lineage4.5 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819910 | Other | lineage4.9 | None | SRR5341315 | Sensitive | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR323108 | HR-TB | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044835 | Sensitive | lineage4 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR6046225 | HR-TB | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR3797086 | Other | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR3283010 | Other | La1 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283025 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736856 | HR-TB | lineage4 | None |
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