lineage | Count |
---|---|
lineage2.2 | 2 |
lineage2.2.1.1 | 3 |
lineage2.2.1 | 8 |
La1.7.1 | 1 |
lineage4.3.4 | 1 |
lineage1.1.3.1 | 1 |
10 | |
lineage4.8 | 1 |
lineage4.9 | 5 |
lineage4.1.2.1 | 4 |
lineage4 | 1 |
lineage5 | 2 |
lineage4.6.1.2 | 1 |
lineage3.1.2.1 | 1 |
lineage3 | 2 |
lineage4.1.1 | 1 |
lineage1.2.2.2 | 1 |
lineage4.3.4.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.3.3 | 1 |
spoligotype | Count |
---|---|
None | 48 |
ID | Drug resistance | Lineage | Country iso2 | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR4814617 | Other | lineage1.1.3.1 | None | SRR3675456 | HR-TB | None | ERR181744 | HR-TB | None | ERR4814748 | Other | lineage4.8 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4816232 | Other | lineage4 | None | ERR4816967 | RR-TB | lineage5 | None | SRR3675555 | HR-TB | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675571 | HR-TB | None | ERR4817131 | Pre-XDR-TB | None | ERR1023509 | Other | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4821799 | Other | lineage2.2.1 | None | ERR4820833 | HR-TB | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821310 | Other | lineage5 | None | ERR4796577 | MDR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796586 | Other | lineage4.9 | None | ERR4822104 | RR-TB | lineage3 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR387051 | HR-TB | None |
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