Rv1221 - p.Ala180Ser
Drug resistance types
29 Sensitive
1 RR-TB
39 HR-TB
7 MDR-TB
2 Pre-XDR-TB
2 XDR-TB
43 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage6.3 | 4 |
| La3;lineage4 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.9 | 42 |
| M.canetti;lineage4.9 | 1 |
| La1.7;lineage4.9 | 3 |
| La3;lineage4.9 | 5 |
| lineage4.1.1.1 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| 7 | |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.2.BCG | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage2.2 | 2 |
| La1.7.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage2 | 1 |
| lineage2.1 | 4 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage2.2.1 | 4 |
| La1.7.1;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La3;lineage4.8 | 1 |
| lineage3.1 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage1.1.1 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.3.3 | 1 |
| La3;lineage2.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.3.4.2 | 1 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.1.2.1 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 123 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR3283028 | Other | La3;lineage4 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR26159043 | Other | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR9786617 | Other | lineage4.1.1.1 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR29096527 | Sensitive | lineage4.9 | None | SRR3675236 | Other | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR28119777 | Other | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR9786843 | Other | None | ERR13265833 | Other | lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR7240492 | HR-TB | La1.7.1 | None | ERR9786604 | Other | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR29050928 | Other | lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR1710057 | Other | lineage2.1 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR3416776 | Other | lineage2.1 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR124636 | Sensitive | lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR12015083 | Other | La3;lineage4.8 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR2514692 | Other | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR28351584 | HR-TB | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR9634265 | Sensitive | lineage4.3.4.2 | None | SRR6044835 | Other | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | ERR9787197 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR234659 | Other | None | ERR3797079 | Sensitive | lineage4.9 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR1640750 | Other | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None |
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