Rv0005 - c.1011A>C
Drug resistance types
12 Sensitive
0 RR-TB
14 HR-TB
3 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 3 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;lineage4.9 | 1 |
| lineage4.9 | 14 |
| lineage4.8 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage4.1.2.1 | 4 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La1.7.1 | 1 |
| lineage2.2.1 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage4 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| 1 | |
| La1.6;lineage4 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 45 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR7902604 | Sensitive | lineage1.1.2 | None |
| ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None |
| ERR3797061 | Other | La1.6;La3;lineage4.9 | None |
| SRR10809074 | Sensitive | lineage4.9 | None |
| ERR13110331 | Sensitive | lineage4.8 | None |
| ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None |
| ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None |
| ERR4815441 | HR-TB | lineage4.9 | None |
| ERR1023525 | HR-TB | La1.7;lineage4.9 | None |
| ERR4796929 | Sensitive | lineage4.9 | None |
| ERR13267618 | Sensitive | lineage1.1.2 | None |
| ERR9786601 | Other | lineage4.1.2.1 | None |
| SRR19295647 | Sensitive | lineage4.9 | None |
| ERR4819422 | HR-TB | lineage4.9 | None |
| SRR6046141 | Other | lineage4.9 | None |
| ERR4815471 | Sensitive | lineage4.9 | None |
| ERR4831199 | Sensitive | lineage4.1.2.1 | None |
| ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None |
| SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| SRR1792478 | HR-TB | La1.7.1 | None |
| SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| ERR6359066 | HR-TB | lineage4.9 | None |
| ERR736856 | Sensitive | lineage4.9 | None |
| ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None |
| ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
| ERR4817731 | HR-TB | lineage4.9 | None |
| ERR4816478 | HR-TB | lineage4 | None |
| ERR4816656 | Other | lineage4.9 | None |
| ERR4797193 | HR-TB | lineage1.1.2 | None |
| ERR369157 | Sensitive | lineage4.9 | None |
| SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
| ERR3804155 | Other | lineage4.1.2.1 | None |
| ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
| ERR9786642 | Other | lineage4.1.2.1 | None |
| SRR28351339 | MDR-TB | lineage4 | None |
| SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
| ERR9786604 | Other | None | |
| SRR28351554 | Sensitive | La1.6;lineage4 | None |
| SRR6045010 | Sensitive | lineage4.9 | None |
| ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None |
| ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None |
| ERR369151 | Other | lineage4.9 | None |
| ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
| ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
