TB-Profiler
Home
Upload
SRA data
Rv0005
- c.1011A>C
Drug resistance types
13 Sensitive
0 RR-TB
15 HR-TB
3 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
14
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
4
lineage4.1.2.1
4
lineage1.1.2
3
lineage4.8
2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
2
lineage4
2
La1.7;lineage3.1;lineage4
1
lineage4.6.2.2
1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9
1
Showing 1 to 10 of 24 entries
Previous
1
2
3
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
48
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023525
HR-TB
La1.7;lineage4.9
None
ERR13110331
Sensitive
lineage4.8
None
ERR13267618
Sensitive
lineage1.1.2
None
ERR2693230
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
ERR2693231
Other
La1.6;La3;lineage4.6.4;lineage4.9
None
ERR2693245
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
ERR2693257
Other
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9
None
ERR3283020
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.9
None
ERR3283024
Other
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9
None
ERR369151
Other
lineage4.9
None
Showing 1 to 10 of 48 entries
Previous
1
2
3
4
5
Next