EBG00000313339 - n.1740G>T
Drug resistance types
28 Sensitive
3 RR-TB
23 HR-TB
9 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
42 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 27 |
| lineage4 | 20 |
| 32 | |
| lineage4;lineage2.2 | 1 |
| lineage3 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage2.2.1 | 10 |
| lineage4.4.1.1 | 1 |
| lineage5.2 | 2 |
| lineage2.1 | 1 |
| lineage4.1.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.8 | 1 |
| lineage4.4.2 | 1 |
| lineage4.4.1.2 | 1 |
| La1.8.1 | 3 |
| lineage1.1.2 | 1 |
| lineage2.2 | 1 |
| lineage1.2.2.2 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 111 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR8692812 | Other | lineage4.9 | None | SRR8692854 | Other | lineage4.9 | None | SRR8692790 | RR-TB | lineage4 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR8692822 | Other | lineage4.9 | None | SRR8692881 | Other | lineage4.9 | None | SRR8692771 | Other | lineage4.9 | None | SRR8692885 | Other | lineage4.9 | None | SRR8692893 | Other | lineage4.9 | None | SRR8692898 | Other | lineage4.9 | None | SRR8692905 | HR-TB | None | SRR8692800 | Other | lineage4 | None | SRR8692782 | Other | lineage4.9 | None | SRR8692824 | Other | lineage4.9 | None | SRR8692818 | Other | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692887 | Other | None | SRR8692878 | Other | lineage4.9 | None | SRR8692776 | Other | lineage4.9 | None | SRR8692867 | Other | lineage4.9 | None | SRR8692894 | Other | lineage4.9 | None | SRR8692811 | Other | lineage4.9 | None | ERR2513534 | Sensitive | lineage3 | gb | SRR8692899 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4816110 | Sensitive | lineage4.9 | gb | ERR212123 | Other | None | SRR3675246 | Sensitive | lineage4 | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR5341453 | Sensitive | None | ERR2660539 | Other | lineage4.9 | None | ERR2517112 | Pre-XDR-TB | lineage2.2.1 | gb | ERR6359082 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6044876 | Sensitive | lineage4 | None | ERR4829119 | Sensitive | lineage4.4.1.1 | it | SRR6511621 | HR-TB | None | SRR6256996 | Pre-XDR-TB | lineage2.2.1 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046492 | Other | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | DRR188519 | Other | lineage4.4.2 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323108 | HR-TB | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR3283041 | Other | lineage4.9 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797067 | Other | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797068 | Other | La1.8.1 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797063 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR473332 | Other | lineage4 | None | ERR4769450 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4798099 | Other | None | ERR4797474 | Other | None | ERR4797264 | Sensitive | None | ERR4799025 | Pre-XDR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799378 | Sensitive | lineage4 | None | ERR6866022 | Other | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6358979 | Other | None | ERR6866410 | Sensitive | None | ERR6866639 | Other | None | ERR9119669 | HR-TB | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | ERR9634265 | Sensitive | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR12882155 | RR-TB | lineage1.2.2.2 | None | SRR10809074 | Sensitive | lineage4 | None | SRR14782405 | HR-TB | None | SRR14801749 | Sensitive | None | SRR1791747 | Other | La1.8.1 | None | SRR1792478 | HR-TB | La1.7.1 | None |
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