Rv1173 - c.684C>G
Drug resistance types
9 Sensitive
0 RR-TB
63 HR-TB
1 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
22 Other
lineage Counts
| lineage | Count |
|---|---|
| 49 | |
| lineage4 | 14 |
| lineage3 | 2 |
| lineage2.2.1 | 4 |
| lineage4.9 | 10 |
| lineage4.2.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4.1;La1.7 | 1 |
| lineage4;lineage3.1 | 1 |
| La1.2 | 1 |
| lineage2.2.1.2 | 3 |
| lineage4.3.4 | 1 |
| lineage2.2 | 3 |
| La1.7.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage2.1 | 1 |
| lineage4.1.2 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 97 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341418 | Other | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341408 | Sensitive | lineage3 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341456 | Other | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341315 | Sensitive | None | SRR6046210 | Other | lineage4 | None | SRR5535933 | HR-TB | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6046046 | Other | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045053 | Other | None | SRR6044835 | Sensitive | lineage4 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6046299 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR4830353 | Other | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | ERR4831117 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046492 | Other | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR067681 | HR-TB | None | SRR8217918 | HR-TB | None | SRR9940975 | Sensitive | lineage4.9 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR502889 | Other | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR133986 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1034634 | HR-TB | None | ERR1063858 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283021 | HR-TB | None | ERR11465802 | Other | lineage4.3.4.1;La1.7 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3439432 | Other | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR4798406 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR473332 | Other | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR387051 | HR-TB | None | ERR400529 | Other | lineage3 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR736856 | HR-TB | lineage4 | None | ERR9119669 | HR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR736835 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | ERR158583 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675488 | HR-TB | None | SRR3675222 | Other | None | SRR3675501 | HR-TB | None | SRR3675270 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | SRR3675550 | Other | None | ERR212034 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675555 | HR-TB | None | SRR4035833 | Other | lineage4.1.2 | None | ERR1035162 | Other | None | ERR245675 | Sensitive | lineage1.1.2 | None |
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