Rv0006 - c.-430T>C
Drug resistance types
59 Sensitive
1 RR-TB
77 HR-TB
5 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| 50 | |
| lineage4.1.1.3 | 1 |
| lineage4 | 65 |
| lineage4.9 | 27 |
| lineage2.1 | 1 |
| lineage3 | 2 |
| lineage4.1.2.1 | 3 |
| lineage2.2.1 | 11 |
| lineage4.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage2.2.1.1 | 5 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage2.2 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4;lineage3.1 | 1 |
| La1 | 1 |
| lineage3.1.2 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 176 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR176778 | HR-TB | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR176779 | HR-TB | None | ERR158583 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675292 | Sensitive | lineage4 | None | ERR181887 | HR-TB | None | ERR176651 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212001 | HR-TB | None | SRR3675550 | Other | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675456 | HR-TB | None | SRR3675571 | HR-TB | None | SRR3675555 | HR-TB | None | ERR4816470 | Other | lineage3 | None | ERR212138 | HR-TB | lineage4 | None | ERR4816656 | HR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4819051 | Other | lineage4 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818929 | HR-TB | None | ERR2514125 | Other | lineage3 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341418 | Other | None | ERR6359082 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | None | SRR5341315 | Sensitive | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341330 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045519 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821057 | HR-TB | lineage4 | None | SRR6045503 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6046133 | HR-TB | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046362 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046397 | Other | None | ERR4828350 | Sensitive | lineage4.4.2 | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046460 | HR-TB | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046824 | HR-TB | None | SRR6046802 | Other | lineage4 | None | ERR323037 | HR-TB | lineage4 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR502889 | Other | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR323045 | HR-TB | None | SRR7496471 | Sensitive | None | SRR9971114 | Other | lineage2.2.1 | None | SRR8217918 | HR-TB | None | ERR1034634 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR067681 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR1063862 | HR-TB | None | ERR1063857 | HR-TB | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063855 | Other | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063859 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR133986 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR3445503 | HR-TB | None | ERR349266 | Sensitive | lineage4.9 | None | ERR3445502 | HR-TB | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797015 | HR-TB | None | ERR4798431 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR387051 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR473332 | Other | lineage4 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797081 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798406 | HR-TB | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR6358979 | Other | None | ERR6358951 | HR-TB | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR736856 | HR-TB | lineage4 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR19295647 | Sensitive | lineage4.9 | None |
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