Rv1221 - c.612T>C


Drug resistance types
1 Sensitive 10 RR-TB 34 HR-TB 27 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 40 Other
lineage Counts
lineage Count
La1.7.1 1
lineage4.1.2 1
La1.8.1 1
La3;lineage4.9 7
lineage2.2.1 4
lineage4.9 27
La1.7;lineage4.9;lineage7 1
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage2.1;lineage4.9;lineage6.3 3
lineage2.1;lineage4.9 5
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.3.4 1
La1.7;lineage4.9 1
lineage1.2.2.1;lineage4.4.1.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.9;lineage7 2
M.canetti;lineage2.1;lineage6.3 2
lineage4.2;lineage4.8.1;lineage4.9 2
lineage4 1
lineage4.9;lineage6.3 3
4
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.2;lineage4.9 3
La3;lineage2.1;lineage4.9 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La2;lineage4.9 1
lineage2.2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 1
La1.7;M.canetti;lineage4.9 2
M.canetti;lineage4.9 2
M.canetti;lineage2.1;lineage4.9 3
La1;lineage4.9 1
La3;lineage2 1
lineage1.1.3.1 1
lineage2.1;lineage2.2;lineage6.3 1
La2;lineage2.2 1
La1.7.X-unk4;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1;lineage2;lineage4.9 1
lineage2.1 1
lineage4.9;lineage6.1.3 1
lineage3.1.2.2 1
lineage4.3.2.1 1
lineage4.3.2;lineage4.9 1
lineage2.2.1.2;lineage7 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.7;lineage4.2 1
lineage2.2 1
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
La1.6;La3;M.canetti;lineage4.2.2 1
spoligotype Counts
spoligotype Count
None 114
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR1791747 Other La1.8.1 None
ERR3797048 Other La3;lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR1167384 Other La3;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR6045053 Other lineage4 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1640750 RR-TB None
SRR28119777 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR5341330 Other lineage4.9 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR212033 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6046593 Other lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR3675585 HR-TB lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR4769452 Other lineage4.9 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR1184381 MDR-TB None
SRR28351584 HR-TB lineage2.2.1 None
SRR25827682 Other None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR6046046 Other lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9119669 MDR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6046382 RR-TB lineage2.2.1 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR1063862 HR-TB lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR4769474 HR-TB lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR1063858 HR-TB lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR11252612 Other La3;lineage4.9 None
ERR234659 HR-TB None
SRR28119805 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR3439432 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675270 Other lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR26399973 Other La3;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None