Rv0006 - c.934_936delTTAinsCTG


Drug resistance types
19 Sensitive 3 RR-TB 62 HR-TB 3 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 35 Other
lineage Counts
lineage Count
La1.7.X-unk4;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 12
lineage2.1;lineage4.3.2 1
M.canetti;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
lineage4.9 26
La1.7;lineage4.9 6
M.canetti;lineage2.2 1
lineage4.1.1.3 1
lineage2.2.2 1
La3;lineage4.9 2
La3;M.canetti;lineage2.1;lineage4.9 9
La1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage2.1;lineage2.2;lineage6.3 1
M.canetti;lineage2.1 1
4
La1.7;M.canetti;lineage4.9 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
M.canetti;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.2;lineage4.9 2
La1.7.1 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage2.2.1 3
La1.8.1 1
lineage2.1;lineage4.9 4
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.6.2.2 2
lineage2.2.1.1 1
La1.2 1
lineage4.1;lineage4.8 1
lineage1.2.1.2 1
lineage2.1;lineage4.9;lineage6.3 1
lineage4.1.2.1 2
lineage3 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage1.2.2.2 1
lineage1.1.3.1 1
lineage4.6.3;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 1
lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage4.8;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
La1.7 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
spoligotype Counts
spoligotype Count
None 123
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4798099 Other lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR4816551 HR-TB lineage4.1.1.3 None
SRR18910194 HR-TB lineage2.2.2 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675488 Other La1.7;lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR3675585 Sensitive lineage4.9 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR9786843 Other None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
SRR13861168 RR-TB lineage4.9 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR3275196 Other lineage2.2.1 nl
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR1063896 Sensitive None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675482 Other lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4816466 HR-TB lineage4.9 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR6866639 Other lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR23961549 Other La1.2 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6044815 Other lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR1640750 Other None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3468607 Other lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
ERR11252736 Other lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675235 Sensitive lineage4.9 None
ERR4798504 RR-TB lineage3 None
ERR5917710 Other lineage4.1.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR1180172 Other lineage2.2.1 None
ERR1034634 HR-TB lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR29096174 Sensitive La1.7;lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR234659 Other None
ERR3801503 Sensitive lineage4.6.2.2 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
SRR3675243 Other lineage4.9 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675222 Other La1.7 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None