lineage | Count |
---|---|
La1.7.1 | 1 |
lineage4.9 | 9 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
lineage3.1.2.2 | 1 |
lineage4.4.1.1 | 9 |
lineage6.1.1 | 2 |
lineage3.1.2.1;lineage3.1.2.2 | 1 |
lineage4.9;lineage9 | 2 |
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
lineage4.4.1.1.1 | 1 |
La2;lineage4.9 | 1 |
lineage2.2.1;lineage4 | 1 |
La2;lineage4.9;lineage9 | 1 |
lineage4.1.1 | 1 |
M.canetti;lineage4.9 | 1 |
1 | |
lineage4.3.2;lineage4.9 | 1 |
lineage4.9;lineage6.3 | 1 |
spoligotype | Count |
---|---|
None | 37 |
ID | Drug resistance | Lineage | Country iso2 | SRR1792478 | HR-TB | La1.7.1 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR11252495 | MDR-TB | lineage4.4.1.1 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR11811467 | MDR-TB | lineage4.4.1.1 | None | ERR11488479 | MDR-TB | lineage4.4.1.1 | None | ERR11488641 | MDR-TB | lineage4.4.1.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR11811425 | MDR-TB | lineage4.4.1.1 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR11488780 | MDR-TB | lineage4.4.1.1 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR11488615 | MDR-TB | lineage4.4.1.1 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR11488929 | MDR-TB | lineage4.4.1.1 | None | SRR22248479 | Sensitive | lineage4.1.1 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR987722 | MDR-TB | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR11488613 | MDR-TB | lineage4.4.1.1 | None |
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