Rv0006 - c.1599G>C


Drug resistance types
12 Sensitive 1 RR-TB 18 HR-TB 2 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 13 Other
lineage Counts
lineage Count
lineage3 2
1
lineage4.1.2.1 3
lineage4.9 23
La1.7;lineage4.9;lineage7 3
lineage2.2.1 3
lineage4.3.4.2.1 2
La1.7;lineage4.9 1
lineage1.2.2.2 1
La2;lineage2.2 1
La1.7.1 1
La1.7;lineage3.1;lineage4 1
La1;lineage2;lineage4.9 1
lineage4.2.1 1
La1;lineage4.9 1
lineage4.4.1.2 1
lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 47
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR28044634 Other lineage3 None
ERR234659 Other None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR1175052 HR-TB lineage4.9 None
SRR6044875 Sensitive lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR4799547 HR-TB lineage2.2.1 None
ERR11465509 Sensitive lineage4.3.4.2.1 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR323037 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR2693252 Sensitive lineage4.9 None
ERR6866807 Other lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR5341373 Other lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR4769521 RR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
SRR14801749 HR-TB lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
SRR8217918 HR-TB lineage4.9 None
SRR3675441 Other lineage4.9 None
SRR29050928 Other lineage4.9 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR10808668 Sensitive lineage2.2.1 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1792478 HR-TB La1.7.1 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR323107 Sensitive lineage4.9 None
ERR216965 Sensitive lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR29096879 Sensitive lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR4769474 HR-TB lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR485006 HR-TB lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR133825 HR-TB La1;lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR736831 Other lineage4.9 None