Rv1221 - c.564T>C


Drug resistance types
11 Sensitive 16 RR-TB 52 HR-TB 28 MDR-TB 0 Pre-XDR-TB 2 XDR-TB 36 Other
lineage Counts
lineage Count
lineage4.9 52
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.9;lineage6.1.3 1
lineage3.1.2.2 1
La3;lineage4.9 8
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage2.1;lineage6.3 1
M.canetti;lineage4.9 1
lineage2.2.1.1 5
M.canetti;lineage2.1 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage2.2.1 8
La1.7.1 2
M.canetti;lineage2.2 2
La3;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage4 1
La1.7;lineage4.9 2
3
La1.2.BCG 1
lineage2.2 1
La2;lineage2.2 1
lineage4.1.2 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La2;lineage4.9 2
lineage2.1;lineage4.9;lineage6.3 2
lineage2.1;lineage4.9 1
lineage2.2.1;lineage6.3 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.7.1;La1.7.X-unk4 1
lineage4 1
La1.7.1;lineage4.9 1
lineage1.1.1 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.2;lineage4.9 3
lineage4.9;lineage6.3 3
La3;lineage2.1;lineage6.3 1
La1.7;M.canetti;lineage4.9 3
lineage4.9;lineage7 3
La1.8.1 1
lineage4.3.4.2.1 1
La1.7;lineage4.9;lineage7 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.3.2.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.3.2;lineage4.9 1
La2;lineage4.9;lineage9 1
lineage4.3.4.2 1
La1.7;lineage4.2 1
lineage1.1.3.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage2.1;lineage4.9;lineage7 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.7.X-unk4;lineage4.9 1
lineage3 1
spoligotype Counts
spoligotype Count
None 145
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3283030 HR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR124636 HR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3797063 Other La3;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR3797047 MDR-TB lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
ERR3283040 HR-TB lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR502510 HR-TB lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
ERR3283018 HR-TB lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR1034634 HR-TB lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
ERR926155 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR926161 Sensitive lineage4.9 None
ERR502511 HR-TB lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR9786843 Other None
SRR28351584 HR-TB lineage2.2.1 None
ERR4797474 Other lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR4810624 MDR-TB lineage2.2 None
ERR702405 HR-TB lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR9970980 HR-TB lineage4.1.2 None
ERR926165 Other lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR3797015 HR-TB lineage4.9 None
ERR926157 Other lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR3283011 Other La3;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR25206951 MDR-TB lineage2.2.1.1 None
ERR926159 Sensitive lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR5341453 Other lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
SRR14066533 RR-TB lineage1.1.1 None
ERR926164 Other lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR4811296 MDR-TB lineage2.2.1.1 cn
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR1640750 RR-TB None
ERR234659 HR-TB None
SRR28119805 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR1792478 HR-TB La1.7.1 None
SRR1791747 Other La1.8.1 None
ERR3797048 Other La3;lineage4.9 None
ERR926156 Other lineage4.9 None
ERR387051 RR-TB lineage4.9 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR926160 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6046382 RR-TB lineage2.2.1 None
SRR6511621 HR-TB lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
ERR926163 Other lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR9634265 Sensitive lineage4.3.4.2 None
SRR6785423 Sensitive lineage2.2.1 None
ERR3797064 Other La3;lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR6785375 Sensitive lineage2.2.1 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR5311094 HR-TB lineage4.9 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR1183144 RR-TB lineage2.2.1 None
SRR5341456 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR971389 Other lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR4798504 RR-TB lineage3 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR3283031 Other La3;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR926154 Sensitive lineage4.9 None