Rv0006 - c.1089C>G
Drug resistance types
13 Sensitive
1 RR-TB
19 HR-TB
9 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2 | 3 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La2;lineage2.2 | 1 |
| lineage4.9 | 28 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.2.1 | 5 |
| lineage3 | 1 |
| M.canetti;lineage1 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| lineage5.2 | 2 |
| La1.7.1 | 1 |
| La1.8.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La2;lineage4.9 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4 | 1 |
| lineage4.4.2 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage2.2.2 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.9;lineage7 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 63 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4810624 | MDR-TB | lineage2.2 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | SRR3675507 | Other | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR27450354 | Sensitive | lineage1.1.1.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR3273109 | HR-TB | lineage4 | None | DRR188519 | Other | lineage4.4.2 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR5535933 | Other | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | SRR29096879 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3797086 | Sensitive | lineage4.9 | None | SRR26331611 | Sensitive | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None |
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