Rv0006 - c.873C>G


Drug resistance types
85 Sensitive 5 RR-TB 76 HR-TB 10 MDR-TB 7 Pre-XDR-TB 0 XDR-TB 46 Other
lineage Counts
lineage Count
74
lineage1.1 1
lineage2.1 2
lineage3.1 2
lineage2 2
lineage4.1 2
lineage2.2.1 9
lineage4 72
lineage4.3.4.2.1 1
lineage4.1.2.1 14
La1 1
lineage4.9 28
La1.8.1 2
lineage4.3.3 2
lineage4.3.2.1 1
lineage4.3.2 1
lineage1.1.3.1 1
lineage2.2.2 1
lineage4.4.1.1 2
lineage4.5 1
lineage2.2 1
lineage1.2.1.2.1 1
La1.7.1 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage3;lineage2.1 1
lineage4.1.1.3 1
lineage4.1.1.2 1
lineage4.1.1 1
lineage1.1.2 1
lineage4.9;lineage2.1 1
spoligotype Counts
spoligotype Count
None 229
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6511621 HR-TB None
SRR6325442 HR-TB None
ERR3077978 Other lineage1.1 None
ERR4831997 MDR-TB lineage2.1 None
ERR323034 HR-TB lineage3.1 None
ERR294248 HR-TB None
ERR323036 HR-TB None
SRR6832171 Pre-XDR-TB lineage2 None
SRR6789624 MDR-TB lineage4.1 None
SRR6832787 RR-TB lineage2.2.1 None
ERR502510 Sensitive lineage4 None
ERR502943 HR-TB None
ERR502889 Other None
ERR323038 HR-TB None
ERR5311099 HR-TB None
ERR5311090 HR-TB None
ERR5311081 HR-TB None
SRR7796666 Pre-XDR-TB lineage2.2.1 None
SRR7535082 Sensitive lineage4 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR8217918 HR-TB None
ERR323041 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323055 HR-TB None
ERR323063 HR-TB None
ERR323066 Sensitive lineage4 None
ERR067681 HR-TB None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR067699 HR-TB lineage4 None
ERR323115 Sensitive lineage4 None
ERR1063883 Sensitive lineage4 None
ERR1063896 Sensitive None
ERR133825 Sensitive lineage4 None
ERR133986 HR-TB None
ERR3273109 MDR-TB lineage4 None
ERR3283032 HR-TB None
ERR3283010 Other La1 None
ERR3283017 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR349265 Sensitive lineage4 None
ERR3283055 HR-TB None
ERR3439432 Other None
ERR3468544 HR-TB None
ERR349264 Sensitive lineage4 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR349266 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR369158 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR369163 Sensitive lineage4 None
ERR373946 Sensitive lineage4 None
ERR373947 Sensitive lineage4 None
ERR3797036 HR-TB None
ERR3797082 Other lineage4.9 None
ERR3797081 Sensitive lineage4 None
ERR3797083 HR-TB None
ERR349296 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363426 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR369162 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR3797016 HR-TB None
ERR3797023 HR-TB La1.8.1 None
ERR3797046 HR-TB None
ERR4796929 Sensitive lineage4 None
ERR403298 HR-TB lineage4 None
ERR4188350 HR-TB None
ERR4797264 Sensitive None
ERR4797184 Sensitive lineage4 None
ERR4798406 HR-TB None
ERR4797474 Other None
ERR4799025 Pre-XDR-TB None
ERR4811493 HR-TB None
SRR1162740 Other lineage4.1.2.1 None
ERR5908228 Other lineage4.3.3 None
ERR6358837 HR-TB None
ERR736834 Sensitive lineage4 None
ERR736872 Sensitive lineage4 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR8976043 HR-TB None
SRR10808399 Sensitive lineage4 None
SRR10808805 Sensitive None
SRR10809074 Sensitive lineage4 None
ERR5917710 Other lineage4.1.2.1 None
ERR6358979 Other None
ERR6866410 Sensitive None
ERR736848 HR-TB None
ERR751326 Sensitive lineage4 None
ERR772255 MDR-TB lineage4.3.2 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9119096 Other lineage4.3.3 None
ERR9634265 Sensitive None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR069978 Pre-XDR-TB lineage2.2.2 None
SRR069989 HR-TB lineage2 None
SRR1165423 Other lineage4.1.2.1 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1173453 Other lineage4.4.1.1 None
SRR1167055 Other lineage4.1.2.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR1165584 Other lineage4.1.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1175507 MDR-TB lineage4 None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1175500 MDR-TB lineage4 None
SRR1175513 Other lineage4.9 None
SRR1175508 Other lineage4.9 None
SRR13837805 Sensitive lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR1181237 Sensitive lineage2.2 None
SRR13837796 Sensitive lineage4.9 None
SRR13861146 Sensitive lineage4.9 None
SRR13861304 Other lineage4.9 None
SRR13861153 Other lineage4.9 None
SRR13861261 Sensitive lineage4.9 None
SRR13861439 RR-TB lineage4.9 None
SRR13861376 Other lineage4.9 None
SRR13861396 HR-TB lineage4.9 None
SRR13861699 Sensitive lineage4.9 None
SRR13861500 RR-TB lineage4.9 None
SRR13861556 Other lineage4.9 None
SRR13861686 RR-TB lineage4.9 None
SRR1510066 Other lineage1.2.1.2.1 None
SRR14801749 Sensitive None
SRR1792478 HR-TB La1.7.1 None
SRR1640750 HR-TB None
SRR1791747 Other La1.8.1 None
ERR10610313 HR-TB None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR9806750 HR-TB None
SRR3675477 Other lineage4.9 None
SRR3675464 HR-TB lineage4.1 None
SRR3675502 Other None
SRR3675473 Sensitive lineage4.9 None
ERR1035239 HR-TB None
SRR6325445 HR-TB None
ERR158583 HR-TB None
ERR161033 HR-TB None
SRR3675482 HR-TB None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
ERR4814536 MDR-TB lineage3;lineage2.1 None
SRR3675486 HR-TB None
SRR3675246 Sensitive lineage4 None
ERR702405 Sensitive lineage2.1 None
SRR3675387 Sensitive None
SRR3675292 Sensitive lineage4 None
SRR3675383 HR-TB None
SRR3675541 Sensitive lineage4.9 None
SRR3675550 Other None
SRR3675545 HR-TB None
ERR4816551 HR-TB lineage4.1.1.3 None
SRR3675558 HR-TB None
SRR3675571 HR-TB None
ERR3275196 Other lineage2.2.1 nl
ERR4816904 Sensitive lineage4.1.2.1 None
ERR1035162 Other None
SRR5341455 Sensitive lineage4 None
ERR4818252 Other lineage4.1.1.2 None
SRR5341387 Other lineage4 None
SRR5341396 Other lineage4 None
SRR5341418 Other None
SAMN02414850 Other lineage4.1.2.1 None
ERR2229143 Other lineage4.1.1 None
ERR4818929 HR-TB None
SRR5341425 Other lineage4 None
SRR5341437 Sensitive lineage4.9 None
SRR5341299 Sensitive lineage4 None
SRR5341298 Sensitive lineage4 None
SRR5341300 Other lineage4 None
SRR5341296 Sensitive lineage4.9 None
SRR5341461 Sensitive lineage4 None
SRR5341303 RR-TB lineage4 None
SRR5341308 Sensitive lineage4 None
SRR5341310 Other lineage1.1.2 None
SRR5341323 Sensitive lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR5341345 Sensitive lineage4.9 None
SRR5341366 Sensitive lineage4 None
SRR5341467 Other lineage4 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2446563 Other lineage2.2.1 nl
SRR5341469 Other lineage4 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
ERR2693239 HR-TB None
SRR6045053 Other None
SRR5535933 HR-TB None
SRR6045706 Sensitive lineage4 None
SRR6045892 Sensitive None
SRR6044819 Sensitive lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6045002 MDR-TB lineage4.9 None
ERR278594 HR-TB None
ERR4821655 Sensitive lineage4 None
SRR6045555 HR-TB None
SRR6046133 HR-TB None
SRR6045952 HR-TB None
SRR6046210 Other lineage4 None
SRR6325444 HR-TB None
SRR6046397 Other None
SRR6325448 HR-TB None
SRR6046514 HR-TB None
SRR6046594 HR-TB lineage4 None
SRR6046492 Other None
SRR6325447 HR-TB None
SRR6046824 HR-TB None
SRR6046897 Sensitive lineage4 None
SRR6397654 HR-TB lineage4.1.2.1 None