Rv1173 - c.1902C>G
Drug resistance types
18 Sensitive
3 RR-TB
109 HR-TB
10 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
35 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 20 |
| lineage4.1.1.3 | 2 |
| 78 | |
| lineage4.1 | 1 |
| lineage4 | 20 |
| lineage3;lineage2.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage2.2.1 | 7 |
| lineage2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.4.1.1 | 3 |
| lineage4.3.4.1 | 1 |
| lineage3 | 3 |
| lineage4.1.2.1 | 8 |
| lineage1.1 | 1 |
| lineage2.2 | 6 |
| lineage3.1 | 2 |
| lineage4.1.2 | 1 |
| lineage4.4.1.2 | 1 |
| La1 | 2 |
| La1.8.1 | 3 |
| lineage1.2.2.2 | 1 |
| lineage6.1.1 | 2 |
| La1.2 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage2 | 1 |
| lineage4.5 | 1 |
| lineage1.2.1.2 | 1 |
| La1.7.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 178 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR8692782 | Other | lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR6325445 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675482 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR4815489 | Sensitive | lineage4.9 | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675510 | Other | None | ERR176740 | HR-TB | None | SRR3675383 | HR-TB | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR212034 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816656 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2509673 | Other | lineage2.2.1 | None | SRR3675545 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212138 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4818929 | HR-TB | None | SRR5341456 | Other | None | ERR1035138 | MDR-TB | None | SRR5341373 | HR-TB | lineage4 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | ERR2516626 | Sensitive | lineage4.3.4.1 | None | SRR5341315 | Sensitive | None | SRR5341313 | HR-TB | None | SRR5341469 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5341470 | HR-TB | None | ERR2517528 | Other | lineage3 | nl | ERR278594 | HR-TB | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | ERR4821179 | Other | lineage4.1.2.1 | gb | SRR6045952 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045217 | Other | lineage4 | None | SRR6046362 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6325444 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR2446563 | Other | lineage2.2.1 | nl | ERR294248 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046737 | Other | lineage4.9 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6046492 | Other | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323039 | HR-TB | None | ERR323055 | HR-TB | None | ERR323041 | HR-TB | None | ERR323063 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323053 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323108 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323085 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR3283010 | Other | La1 | None | ERR1063857 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283028 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283040 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797046 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797060 | Other | La1.8.1 | None | ERR3797048 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR3797081 | Sensitive | lineage4 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR3797086 | Other | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4188247 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188350 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769521 | HR-TB | None | ERR4796876 | MDR-TB | lineage3.1.2.1 | in | ERR4799513 | HR-TB | lineage2.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6358837 | HR-TB | None | ERR6866410 | Sensitive | None | ERR6866807 | HR-TB | lineage4 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8976043 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6358979 | Other | None | ERR6359045 | HR-TB | None | ERR736865 | HR-TB | None | ERR987722 | HR-TB | None | ERR9896144 | Other | lineage3 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR069989 | HR-TB | lineage2 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1174897 | HR-TB | None | SRR13838004 | Sensitive | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13837849 | Sensitive | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861400 | Other | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR18391712 | Other | La1.7.1 | None | SRR1640750 | HR-TB | None | SRR1792478 | HR-TB | La1.7.1 | None |
|---|
