Rv0001 - c.624C>T
Drug resistance types
10 Sensitive
1 RR-TB
9 HR-TB
1 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
22 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 12 |
| La3;lineage4.9 | 6 |
| La1.7;M.canetti;lineage4.9 | 2 |
| M.canetti;lineage2.2 | 2 |
| La2;lineage4.9 | 1 |
| lineage3 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 3 |
| lineage4 | 4 |
| lineage2.2 | 1 |
| 1 | |
| La1;lineage4.9 | 1 |
| lineage2.2.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1.7;lineage4.9 | 1 |
| La1.2.BCG | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.7.1 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 45 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4596910 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR11252736 | Other | lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR2517164 | Sensitive | lineage4 | nl | ERR4799513 | HR-TB | lineage2.2 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR212001 | HR-TB | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR3275184 | Sensitive | lineage4 | nl | SRR3675270 | Other | lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR6045053 | Other | lineage4 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR13194148 | Sensitive | lineage4.4.2 | None | ERR2446492 | Sensitive | lineage4 | nl |
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