Rv0001 - c.699G>C
Drug resistance types
11 Sensitive
8 RR-TB
21 HR-TB
6 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1 | 13 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage2.2.1 | 2 |
| lineage4.9 | 21 |
| La1.7.1;lineage4.9 | 1 |
| La1;lineage4.9 | 2 |
| lineage4.9;lineage7 | 1 |
| La3;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4 | 1 |
| lineage2.2 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage1.1.3.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.3.4 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.7.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 61 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR551242 | MDR-TB | lineage4.4.1.1 | sz | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR552763 | MDR-TB | lineage4.4.1.1 | sz | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769450 | Other | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR11465220 | RR-TB | lineage4.4.1.1 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR552599 | MDR-TB | lineage4.4.1.1 | sz | ERR176778 | HR-TB | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR6045555 | Other | lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR11466003 | Sensitive | lineage4.4.1.1 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR6045053 | Other | lineage4 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046046 | Other | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | ERR8774407 | RR-TB | lineage4.4.1.1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR11466317 | RR-TB | lineage4.4.1.1 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR11252621 | Sensitive | lineage4.4.1.1 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR11465109 | RR-TB | lineage4.4.1.1 | None | ERR3283042 | Other | lineage4.9 | None | ERR4423725 | RR-TB | lineage4.4.1.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR553282 | MDR-TB | lineage4.4.1.1 | sz | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR29055598 | RR-TB | lineage4.4.1.1 | None | ERR11465473 | RR-TB | lineage4.4.1.1 | None |
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