Rv3547 - c.-198_-196delCTCinsTTG
Drug resistance types
5 Sensitive
0 RR-TB
33 HR-TB
9 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| 39 | |
| lineage4 | 7 |
| lineage3 | 1 |
| lineage2.2.1 | 3 |
| lineage1.1.3.1 | 1 |
| lineage4.3.3 | 3 |
| lineage4.9 | 6 |
| lineage3.1 | 2 |
| lineage2 | 2 |
| La1.7.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 68 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3445501 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR4407463 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR4810741 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR9787197 | Other | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR736867 | HR-TB | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR4811105 | HR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1172857 | MDR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1175074 | MDR-TB | None | SRR1173400 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1175090 | Other | lineage4.9 | None | SRR1184294 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196546 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196768 | MDR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR12142341 | HR-TB | None | SRR14801749 | Sensitive | None | SRR12416824 | HR-TB | None | SRR15368973 | Other | None | SRR20969677 | HR-TB | lineage2 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR19304036 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR212123 | Other | None | ERR181744 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3742665 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR6045892 | Sensitive | None | ERR4818394 | Other | lineage4.9 | None | ERR4818347 | Other | lineage4.1.2 | None | SRR6044875 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | None | SRR7585435 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR7535086 | Other | None | ERR1063858 | HR-TB | None |
|---|
