Rv3547 - c.-198_-196delCTCinsTTG
Drug resistance types
3 Sensitive
1 RR-TB
12 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1 | 1 |
| lineage4.1.2 | 1 |
| 3 | |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| La3;lineage2 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage4.9 | 10 |
| lineage1.1.3.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage7 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 31 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12142341 | HR-TB | lineage2.1 | None | ERR4818347 | Other | lineage4.1.2 | None | SRR1196768 | MDR-TB | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR7535086 | Other | None | ERR212138 | HR-TB | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR1173400 | Other | lineage4.9 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR29017081 | Sensitive | lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR4407463 | HR-TB | None | SRR1172951 | Other | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR4800341 | Other | lineage3 | None | SRR1184294 | Other | lineage4.9 | None |
|---|
