EBG00000313339 - n.1545G>A
Drug resistance types
13 Sensitive
1 RR-TB
15 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 13 |
| lineage4.3.4.1 | 4 |
| lineage2.2.1 | 2 |
| lineage2.2 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La2;lineage2.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.3.4 | 1 |
| La1.7;lineage4.9;lineage7 | 1 |
| La2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 39 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769521 | RR-TB | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR28351488 | MDR-TB | lineage2.2.1 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR11466444 | Sensitive | lineage4.3.4.1 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR13285191 | Sensitive | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | ERR245675 | Sensitive | lineage1.1.2 | None | SRR5341456 | Other | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR13285192 | Sensitive | lineage4.9 | None | ERR11466445 | Sensitive | lineage4.3.4.1 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None |
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