lineage | Count |
---|---|
lineage4.9 | 27 |
lineage2.1;lineage4.9;lineage6.3 | 1 |
lineage2.2 | 2 |
lineage4.9;lineage9 | 1 |
lineage3.1.2.2 | 1 |
lineage4.4.1.2 | 1 |
3 | |
M.canetti;lineage2.2 | 2 |
lineage4.9;lineage7 | 1 |
La1.6;lineage4 | 1 |
M.canetti;lineage2.2.2;lineage6.2 | 2 |
La2;lineage4.9 | 1 |
lineage1;lineage4.9 | 1 |
lineage2.2.1 | 1 |
lineage4.6.2.2 | 2 |
lineage4 | 1 |
La1.7.1;La1.7.X-unk4;lineage7 | 1 |
lineage4.3.2;lineage4.9 | 1 |
lineage4.9;lineage6.3 | 1 |
lineage4.3.4 | 1 |
La1.7.1;La1.7.X-unk4 | 1 |
La2;lineage4.9;lineage9 | 1 |
La1.7.1;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 55 |
ID | Drug resistance | Lineage | Country iso2 | ERR1063858 | HR-TB | lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR29096410 | Other | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR9786843 | Other | None | ERR987722 | MDR-TB | None | ERR176778 | HR-TB | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | ERR176651 | Other | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR473332 | Other | lineage4.9 | None | ERR212001 | HR-TB | None | ERR181824 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None |
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