lineage | Count |
---|---|
72 | |
lineage4.1 | 1 |
lineage2.2.1 | 2 |
lineage4.3.4.2.1 | 1 |
lineage4 | 14 |
lineage4.3 | 1 |
lineage4.1.2.1 | 4 |
lineage3.1 | 2 |
lineage4.3.4 | 1 |
lineage2.2 | 1 |
lineage4.9 | 2 |
La3 | 1 |
spoligotype | Count |
---|---|
None | 102 |
ID | Drug resistance | Lineage | Country iso2 | SRR1640750 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | ERR176778 | HR-TB | None | ERR161033 | HR-TB | None | ERR176779 | HR-TB | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675488 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675486 | HR-TB | None | SRR3675222 | Other | None | ERR181824 | HR-TB | lineage4 | None | ERR1035162 | Other | None | ERR176651 | HR-TB | None | ERR212001 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR3675501 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675502 | Other | None | SRR3675545 | HR-TB | None | SRR3675550 | Other | None | ERR212033 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | ERR4819051 | Other | lineage4 | None | SRR6325442 | HR-TB | None | SRR5341418 | Other | None | ERR1035138 | MDR-TB | None | ERR2693239 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045053 | Other | None | SRR6046046 | Other | None | SRR6325444 | HR-TB | None | ERR278594 | HR-TB | None | ERR4830353 | Other | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6046482 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR323036 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR502889 | Other | None | ERR294248 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323038 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323045 | HR-TB | None | ERR323041 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323107 | Other | lineage4 | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR1063859 | HR-TB | None | ERR067681 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1034652 | Other | None | ERR1063858 | HR-TB | None | ERR3283017 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR133986 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3439432 | Other | None | ERR3445501 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797016 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR3797083 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4188350 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR702404 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6358837 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | ERR9119669 | HR-TB | None | ERR8976043 | HR-TB | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR13861699 | Sensitive | lineage4.9 | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1169249 | Other | La3 | None | SRR13861305 | Other | lineage4.9 | None |
---|