Rv1221 - c.406_408delCTAinsTG
Drug resistance types
1 Sensitive
3 RR-TB
11 HR-TB
12 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.3.4 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage4.9 | 13 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| La1;lineage4.9 | 2 |
| lineage4.9;lineage7 | 1 |
| La2;lineage2.2 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 33 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR6044835 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
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