Rv0006 - c.42G>C
Drug resistance types
2 Sensitive
0 RR-TB
17 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.9 | 8 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| La2;lineage2.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 26 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None |
| SRR19295647 | Sensitive | lineage4.9 | None |
| ERR736875 | HR-TB | lineage4.9 | None |
| ERR1063858 | HR-TB | lineage4.9 | None |
| ERR038268 | HR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None |
| SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None |
| ERR1063862 | HR-TB | lineage4.9 | None |
| ERR212138 | HR-TB | lineage4.9 | None |
| ERR181824 | HR-TB | lineage4.9 | None |
| ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None |
| SRR6045399 | Other | M.canetti;lineage4.9 | None |
| ERR1023525 | HR-TB | La1.7;lineage4.9 | None |
| ERR1063849 | HR-TB | lineage4.9 | None |
| ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None |
| ERR736817 | HR-TB | lineage4.3.4 | None |
| ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
| ERR1063839 | MDR-TB | La2;lineage2.2 | None |
| SRR6046577 | Other | lineage4.6.3;lineage4.9 | None |
| ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None |
| ERR1063857 | MDR-TB | La2;lineage4.9 | None |
| ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None |
| ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None |
| ERR4817731 | HR-TB | lineage4.9 | None |
| ERR133825 | HR-TB | La1;lineage4.9 | None |
| ERR323056 | HR-TB | lineage4.4.1.2 | None |
