EBG00000313339 - n.1748A>T
Drug resistance types
7 Sensitive
3 RR-TB
35 HR-TB
8 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
28 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage4.3.4 | 1 |
| lineage4.9 | 30 |
| La2;lineage4.9;lineage9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La3;lineage4.9 | 6 |
| lineage6.1.1 | 2 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.2 | 2 |
| M.canetti;lineage4.9 | 1 |
| La2;lineage4.9 | 2 |
| lineage4.9;lineage9 | 2 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1 | 4 |
| 1 | |
| La1;lineage4.9 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La1.8.1 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage1.1.1 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.3.4 | 1 |
| La2;lineage2.2 | 1 |
| lineage1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 81 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR4816656 | Other | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | ERR987722 | MDR-TB | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR4816478 | HR-TB | lineage4 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR176751 | Other | lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None |
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