TB-Profiler
Home
Upload
SRA data
Rv2245
- c.474T>G
Drug resistance types
5 Sensitive
4 RR-TB
35 HR-TB
8 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
34 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
43
lineage2.2.1
5
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
4
lineage4.9;lineage7
3
La1.7;lineage4.9
2
lineage4
2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
2
La1.7.1;La1.7.X-unk4
1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9
1
lineage4.6.3;lineage4.9
1
Showing 1 to 10 of 33 entries
Previous
1
2
3
4
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
87
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023525
HR-TB
La1.7;lineage4.9
None
ERR1063839
MDR-TB
La2;lineage2.2
None
ERR1063849
HR-TB
lineage4.9
None
ERR1063857
MDR-TB
La2;lineage4.9
None
ERR1063858
HR-TB
lineage4.9
None
ERR1063859
HR-TB
La1.7.1;lineage4.9
None
ERR1063862
HR-TB
lineage4.9
None
ERR108125
RR-TB
lineage4.9
None
ERR11252558
Other
lineage4.6.3;lineage4.9
None
ERR11252664
Other
lineage2.2.1
None
Showing 1 to 10 of 87 entries
Previous
1
2
3
4
5
…
9
Next