Rv3596c - c.1941C>G
Drug resistance types
23 Sensitive
2 RR-TB
28 HR-TB
7 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4 | 1 |
| lineage4.9 | 44 |
| lineage2.2.1 | 4 |
| lineage4.8 | 2 |
| lineage4.9;lineage9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1;lineage3;lineage4 | 1 |
| lineage3 | 3 |
| lineage4.3.2.1 | 2 |
| lineage4 | 1 |
| lineage1.1.1 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.1.1.3 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| M.canetti;lineage1 | 1 |
| La1.8.1 | 2 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| La1.2.BCG | 1 |
| La1.7;lineage4.9 | 2 |
| lineage3.1.3 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.5 | 1 |
| La1;lineage4.9 | 1 |
| La1.2 | 1 |
| 1 | |
| lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 81 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR736817 | HR-TB | lineage4.3.4 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR15014682 | MDR-TB | lineage4.8 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR926163 | Other | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR4797201 | Other | lineage1.2.2.2 | None | SRR25827605 | Pre-XDR-TB | lineage2.2.1;lineage3;lineage4 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR28044634 | Other | lineage3 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR7236330 | Other | La1.8.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR6198317 | Other | La1.2 | None | ERR736831 | Other | lineage4.9 | None | ERR234659 | Other | None | ERR736875 | HR-TB | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR28351584 | HR-TB | lineage2.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None |
|---|
