EBG00000313339 - n.1063C>T

Drug resistance types
18 Sensitive 5 RR-TB 20 HR-TB 11 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 23 Other
lineage Counts
lineage Count
lineage4.9 38
lineage2.2.1 5
La1.2.BCG 2
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.9 4
lineage1.1.2 3
La3;M.canetti;lineage4.9 1
La1.7;lineage4.9;lineage7 2
La2;lineage4.9 1
lineage2.1;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
lineage4.3.4.2.1 3
lineage4.3.4.2 1
lineage4.4.1.2 1
lineage6.1.2 1
lineage4.5 2
M.canetti;lineage4.9;lineage9 1
lineage4.9;lineage7 2
La1.7.X-unk4;lineage4.9 1
La1.7;lineage3.1;lineage4 1
lineage1;lineage4.9 1
M.canetti;lineage1 1
La1.7.1;lineage4.9 1
lineage3 1
lineage2.1;lineage4.9;lineage7 1
lineage4.3.4 1
La2;lineage2.2 1
spoligotype Counts
spoligotype Count
None 79
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR736875 HR-TB lineage4.9 None
SRR21732165 HR-TB lineage2.2.1 None
SRR5341293 Sensitive lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR1915485 Other La1.2.BCG None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR926155 Other lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR970445 MDR-TB lineage2.2.1 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR245675 Sensitive lineage1.1.2 None
ERR176651 Other lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR926156 Other lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR9119669 MDR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR926160 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR3797081 Sensitive lineage4.9 None
ERR11465509 Sensitive lineage4.3.4.2.1 None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR9787030 RR-TB lineage6.1.2 None
ERR926161 Sensitive lineage4.9 None
SRR24083738 Sensitive lineage4.5 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR181824 MDR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR28045745 Sensitive lineage1.1.2 None
SRR5341373 Other lineage4.9 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR926165 Other lineage4.9 None
ERR181887 Other lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR3675582 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR1063846 HR-TB lineage4.9 None
SRR5067418 Sensitive lineage4.5 vn
ERR926163 Other lineage4.9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR926164 Other lineage4.9 None
ERR3797086 Sensitive lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR970413 MDR-TB lineage2.2.1 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR212125 HR-TB lineage4.9 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR971389 Other lineage4.9 None
SRR28045741 Sensitive lineage1.1.2 None
SRR28044873 Pre-XDR-TB lineage3 None
ERR6866807 RR-TB lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR736817 HR-TB lineage4.3.4 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR4188247 HR-TB lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR926162 Sensitive lineage4.9 None
ERR387051 RR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR176778 HR-TB lineage4.9 None