lineage | Count |
---|---|
lineage2.2.1 | 8 |
lineage2.2.1.1 | 4 |
La1.8.1 | 1 |
39 | |
lineage4.5 | 3 |
lineage4.9 | 5 |
lineage9 | 1 |
lineage4 | 24 |
lineage3 | 2 |
lineage4.1.1.2 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.1 | 1 |
lineage4.1.2 | 1 |
lineage4.3.2.1 | 1 |
lineage2.2 | 2 |
lineage4.3.4 | 1 |
lineage4.6.1.1 | 1 |
lineage1.1.3.1 | 1 |
spoligotype | Count |
---|---|
None | 97 |
ID | Drug resistance | Lineage | Country iso2 | SRR1180172 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR14801749 | Sensitive | None | SRR16057938 | Sensitive | lineage4.5 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR8692807 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR11068827 | Sensitive | lineage9 | None | ERR11082325 | Sensitive | lineage4.5 | None | ERR176651 | HR-TB | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | ERR212125 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | ERR4819607 | Other | lineage3 | None | SRR3675571 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341453 | Sensitive | None | SRR5341467 | Other | lineage4 | None | ERR2516697 | MDR-TB | lineage2.2.1 | pe | SRR5341308 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR6044897 | Sensitive | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | SRR6046397 | Other | None | SRR6511621 | HR-TB | None | ERR323085 | Sensitive | lineage4 | None | SRR6981961 | Sensitive | lineage2.2.1 | None | ERR294266 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535086 | Other | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323045 | HR-TB | None | ERR027293 | Other | None | ERR1063857 | HR-TB | None | ERR1035122 | Sensitive | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR3283014 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063896 | Sensitive | None | ERR137286 | Sensitive | lineage4 | None | ERR3283047 | HR-TB | None | ERR3283028 | Other | None | ERR3283025 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797064 | Sensitive | None | ERR4797588 | MDR-TB | lineage3 | None | ERR405209 | Sensitive | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR3797087 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR4769521 | HR-TB | None | ERR4797264 | Sensitive | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798099 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6866639 | Other | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6866022 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | SRR10808399 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9119669 | HR-TB | None | ERR9125830 | Sensitive | lineage4.5 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808805 | Sensitive | None |
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