Rv0668 - c.3210C>T
Drug resistance types
25 Sensitive
4 RR-TB
16 HR-TB
8 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 28 |
| lineage2.2.1 | 5 |
| lineage3 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.5 | 3 |
| lineage1;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage4.2;lineage4.9 | 3 |
| lineage4.9;lineage7 | 1 |
| lineage2.2 | 1 |
| lineage4.3.4 | 1 |
| La2;lineage2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.1.2 | 1 |
| La2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 67 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR14801749 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR11082325 | Other | lineage4.5 | None | ERR181887 | Other | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR926164 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR29097066 | Sensitive | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR16057938 | Sensitive | lineage4.5 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR5341453 | Other | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR9125830 | Sensitive | lineage4.5 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR11068827 | Sensitive | lineage9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None |
|---|
