Rv3596c - c.2331C>T
Drug resistance types
2 Sensitive
1 RR-TB
19 HR-TB
7 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 12 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.3.4 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage2.2.1 | 3 |
| lineage4.9;lineage7 | 3 |
| lineage4.9;lineage6.3 | 1 |
| lineage5.2 | 2 |
| 2 | |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.2 | 1 |
| lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 39 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4816656 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675582 | Other | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR212001 | HR-TB | None | ERR234659 | Other | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR387051 | Other | lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4816478 | HR-TB | lineage4 | None | SRR8217918 | HR-TB | lineage4.9 | None |
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