Rv0006 - c.2082T>G
Drug resistance types
7 Sensitive
1 RR-TB
43 HR-TB
8 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
27 Other
lineage Counts
| lineage | Count |
|---|---|
| 54 | |
| lineage4.1.2.1 | 1 |
| lineage4 | 8 |
| lineage4.4.1.1 | 1 |
| lineage4.9 | 6 |
| lineage2.2.1 | 3 |
| lineage3.1 | 2 |
| lineage4.1.1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage2 | 2 |
| lineage4.9;La3 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.5;lineage4.3.3 | 2 |
| lineage4.5 | 1 |
| lineage3 | 2 |
| lineage4.3.4 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 89 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9786671 | Other | None | ERR9786604 | Other | None | ERR9787197 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR1172234 | Other | None | SRR10808399 | Sensitive | lineage4 | None | SRR1169194 | Other | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172857 | MDR-TB | None | SRR1173118 | Other | None | SRR1173153 | HR-TB | None | SRR1173706 | Other | lineage4.9 | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173629 | Other | None | SRR12142341 | HR-TB | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196566 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196768 | MDR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR14801749 | Sensitive | None | SRR19304036 | HR-TB | None | SRR26159043 | Other | lineage4.9 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR12416824 | HR-TB | None | SRR15368973 | Other | None | SRR20969677 | HR-TB | lineage2 | None | SRR25827682 | Other | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | ERR4817060 | RR-TB | None | ERR4816466 | HR-TB | None | ERR2245348 | Sensitive | lineage3.1.1 | None | SRR5067266 | Sensitive | lineage4.5;lineage4.3.3 | vn | SRR5341302 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3742665 | HR-TB | None | SRR5073572 | HR-TB | lineage4.5 | vn | SRR5341333 | HR-TB | None | SRR6789626 | Other | None | SRR6046225 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6046385 | Other | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR502532 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR323045 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | SRR7585435 | Other | lineage4.9 | None | ERR323043 | HR-TB | None | ERR1063862 | HR-TB | None | ERR4407463 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3445503 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR400501 | Sensitive | lineage3 | None | ERR4800341 | Other | lineage3 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4831937 | Sensitive | lineage4.5;lineage4.3.3 | None | ERR4811493 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4810741 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR702406 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR736875 | HR-TB | lineage4 | None | ERR736874 | HR-TB | None |
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