Rv1173 - c.562T>C


Drug resistance types
12 Sensitive 2 RR-TB 50 HR-TB 5 MDR-TB 0 Pre-XDR-TB 2 XDR-TB 60 Other
lineage Counts
lineage Count
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.2;lineage4.6.3;lineage4.9.1 1
M.canetti;lineage2.2.2;lineage6.2 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.7;lineage4.9 5
lineage4 2
lineage2.2 5
lineage4.6.3;lineage4.9 2
La3;lineage4.9 5
lineage2.2.1 4
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.8 1
lineage4.9 50
La1.2;La1.8.1 1
La1;lineage2;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage3 1
lineage4.9;lineage7 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.2.BCG 1
3
La1.6;lineage4 1
M.canetti;lineage2.2 2
lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage4.3.1;lineage4.9;lineage6 1
lineage1;lineage4.9 1
M.canetti;lineage4.9 2
La1.6;La3;lineage4.9 1
lineage6.1.3 1
La1.7;lineage4.9;lineage7 1
lineage2.2.1.1 2
La1.7;M.canetti;lineage4.9 3
lineage4.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.3.4 1
lineage4.4.1.1.1 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.9;lineage6.3 1
La1.7.1;lineage4.9 1
La1;lineage4.9 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.9;lineage6.1.3 1
lineage2.2.1.2;lineage7 1
spoligotype Counts
spoligotype Count
None 131
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6045053 Other lineage4 None
SRR20969708 HR-TB lineage2.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4799025 Other lineage4.8 None
SRR14782054 Other lineage4.9 None
ERR181887 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR4769450 Other lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675248 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR990545 Other lineage3 None
ERR4819877 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR9786843 Other None
ERR2514692 Other None
SRR10808730 Other lineage4.9 None
ERR176778 HR-TB lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1180137 Other lineage2.2.1 None
ERR266125 Other La3;M.canetti None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR6045548 Sensitive lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR1063862 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR8217918 HR-TB lineage4.9 None
ERR1023236 Other lineage6.1.3 None
ERR5311094 HR-TB lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR1180147 Other lineage2.2.1.1 None
ERR6359082 Other lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6046878 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR176651 Other lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675270 Other lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR1063896 Sensitive None
SRR5535933 Other lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4820773 HR-TB lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323115 Sensitive lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR3283032 Other lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR12416840 MDR-TB lineage4.9 None
ERR176751 Other lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR1183144 Other lineage2.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4819422 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None