lineage | Count |
---|---|
lineage2.2.1 | 5 |
lineage2.2.1.1 | 2 |
lineage4.2;La1.7 | 1 |
lineage4 | 15 |
lineage4.3.4.2.1 | 3 |
22 | |
lineage2.1 | 1 |
lineage4.8 | 1 |
lineage3 | 1 |
lineage4.9 | 2 |
lineage4.7 | 1 |
lineage2.2 | 2 |
lineage4;lineage3.1 | 1 |
lineage4.3.4 | 1 |
spoligotype | Count |
---|---|
None | 58 |
ID | Drug resistance | Lineage | Country iso2 | SRR1180172 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR11972257 | Other | lineage4 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR176778 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR176779 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR176651 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR181887 | HR-TB | None | ERR212034 | HR-TB | None | ERR2229523 | Sensitive | lineage4.8 | None | ERR4816470 | Other | lineage3 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None | SRR6046482 | HR-TB | None | SRR6046225 | HR-TB | None | ERR1034652 | Other | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR294266 | HR-TB | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | ERR323045 | HR-TB | None | ERR1034634 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063858 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR3445503 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4769521 | HR-TB | None | ERR4796577 | MDR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR736875 | HR-TB | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR10315551 | Sensitive | lineage2.2.1 | None |
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