Rv3596c - c.2196C>T
Drug resistance types
4 Sensitive
1 RR-TB
53 HR-TB
9 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
42 Other
lineage Counts
| lineage | Count |
|---|---|
| 58 | |
| La1.2 | 1 |
| lineage2.2.1 | 7 |
| lineage4.3.4 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4 | 10 |
| lineage1.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage6.3.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.9 | 12 |
| lineage4.3.3 | 2 |
| lineage3.1 | 2 |
| lineage2 | 2 |
| lineage2.1 | 2 |
| lineage4.8 | 2 |
| lineage4.9;La3 | 1 |
| lineage4.1.1.1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1 | 1 |
| lineage4.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 114 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769450 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR4811493 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4810741 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736867 | HR-TB | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR736875 | HR-TB | lineage4 | None | ERR736874 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9786604 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1172234 | Other | None | SRR1169194 | Other | None | SRR1172817 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1173153 | HR-TB | None | SRR1173118 | Other | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172857 | MDR-TB | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172951 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1173166 | Other | lineage4.9 | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173363 | HR-TB | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173778 | Other | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173788 | Other | None | SRR1175049 | RR-TB | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184381 | MDR-TB | None | SRR1184372 | MDR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184388 | Other | None | SRR1184380 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196546 | HR-TB | None | SRR15368973 | Other | None | SRR14782405 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR19304036 | HR-TB | None | SRR1710057 | Other | lineage2.1 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR20969677 | HR-TB | lineage2 | None | ERR11081258 | Other | lineage4.8 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR25827682 | Other | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR3675503 | Sensitive | lineage4.9 | None | SRR26159043 | Other | lineage4.9 | None | SRR3675488 | HR-TB | None | SRR3675222 | Other | None | ERR181824 | HR-TB | lineage4 | None | SRR3675501 | HR-TB | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR3416776 | Other | lineage2.1 | None | ERR2229016 | Sensitive | lineage4.8 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4816466 | HR-TB | None | SRR3742665 | HR-TB | None | ERR502912 | Other | lineage2.2.1 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR2446566 | Other | lineage4.1 | None | ERR2513470 | Other | lineage4.2.2.2 | None | SRR5341456 | Other | None | SRR5341302 | HR-TB | None | SRR5341330 | HR-TB | None | SRR6046210 | Other | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | ERR2652925 | HR-TB | lineage4.9 | None | SRR6045053 | Other | None | SRR6046299 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6046253 | HR-TB | lineage4.9 | None | ERR3283021 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR7585435 | Other | lineage4.9 | None | ERR1035157 | Other | lineage4.9 | None | ERR4830353 | Other | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | ERR502908 | HR-TB | lineage2.2.1 | None | ERR3283055 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3804155 | Other | lineage4.1.2.1 | None |
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