Rv3596c - c.2196C>T


Drug resistance types
0 Sensitive 2 RR-TB 23 HR-TB 9 MDR-TB 4 Pre-XDR-TB 1 XDR-TB 71 Other
lineage Counts
lineage Count
lineage4.9 32
lineage4.6.2.2 1
lineage2.2.1 7
lineage4.1.2.1 5
8
lineage4.9;lineage6.3 5
La3;lineage2.1;lineage4.9;lineage6.3 3
La1.7;lineage4.9 4
La1.8.1 1
lineage2.1;lineage4.9 5
lineage4.2.2.2 1
La1.7.1;La1.7.X-unk4 1
lineage2.1;lineage4.1.4;lineage4.9 1
La3;lineage2.2.2 1
La3;lineage4.9 2
La3 2
lineage4.9;lineage7 1
La3;lineage2.1;lineage4.9 2
lineage3.1 1
La1.7;M.canetti;lineage4.9 2
lineage4.1.1.1 1
La1.7 1
lineage2.1;lineage4.9;lineage6.3 3
La3;lineage2.1;lineage6.3 1
lineage4.3.4 1
La3;lineage2 1
lineage6.3.1 1
lineage2.1 3
M.canetti;lineage2.1;lineage4.9 2
lineage2.2.1;lineage3 1
lineage2.2.1;lineage6.3 1
La3;lineage2.2.1 1
lineage4.3.3 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.9;lineage6.1.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 1
La3;M.canetti;lineage2.2.1 1
La3;lineage1.1.2 1
lineage2.2 1
spoligotype Counts
spoligotype Count
None 110
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR29016780 Other lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR1184294 Other lineage4.9 None
ERR502912 Other lineage2.2.1 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR1172857 Other None
SRR28119805 Other lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR1184372 MDR-TB None
ERR9786604 Other None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR29096541 Other lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675385 Other La1.7;lineage4.9 None
SRR7617649 Other La1.8.1 None
SRR18003019 Other lineage2.2.1 None
SRR6046210 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR13245558 MDR-TB La3;lineage2.2.2 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR1172728 RR-TB La3 None
ERR13267017 Pre-XDR-TB lineage2.2.1 None
SRR1172817 Other La3 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR3675488 Other La1.7;lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR25827682 Other None
SRR6789621 Other lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR1172951 Other lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR3675222 Other La1.7 None
SRR1196583 Other lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR736817 HR-TB lineage4.3.4 None
SRR20969677 HR-TB La3;lineage2 None
ERR9787139 Other lineage6.3.1 None
SRR1710057 Other lineage2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1196494 MDR-TB None
SRR3675267 Other La1.7;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR5341330 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
SRR28119753 Other lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR1173400 Other lineage4.9 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR28119752 Other lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR6046485 Other lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
SRR1184381 MDR-TB None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
ERR3283055 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR1173778 Other lineage4.9 None
SRR1196768 MDR-TB None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
SRR3416776 Other lineage2.1 None
SRR3675501 Other La1.7;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR1196677 Other lineage2.2 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
SRR26159043 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR1196546 Other lineage4.9 None
SRR29093909 Other lineage4.9 None
SRR1165699 Other lineage4.9 None
SRR28119777 Other lineage4.9 None