TB-Profiler
Home
Upload
SRA data
Rv3596c
- c.2196C>T
Drug resistance types
0 Sensitive
2 RR-TB
24 HR-TB
9 MDR-TB
4 Pre-XDR-TB
1 XDR-TB
71 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
32
8
lineage2.2.1
7
lineage4.9;lineage6.3
5
lineage2.1;lineage4.9
5
lineage4.1.2.1
5
lineage2.1;lineage4.9;lineage6.3
4
La1.7;lineage4.9
4
lineage2.1
3
La3;lineage2.1;lineage4.9;lineage6.3
3
Showing 1 to 10 of 40 entries
Previous
1
2
3
4
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
111
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1063849
HR-TB
lineage4.9
None
ERR13245558
MDR-TB
La3;lineage2.2.2
None
ERR13265528
Other
lineage4.9;lineage6.3
None
ERR13265748
Other
lineage4.9;lineage6.3
None
ERR13267017
Pre-XDR-TB
lineage2.2.1
None
ERR1334034
Other
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
None
ERR2041725
MDR-TB
lineage4.1.2.1
None
ERR2041726
MDR-TB
lineage4.1.2.1
None
ERR2446566
Other
lineage4.9
None
ERR2513470
Other
lineage4.2.2.2
None
Showing 1 to 10 of 111 entries
Previous
1
2
3
4
5
…
12
Next