lineage | Count |
---|---|
71 | |
lineage2.2.1 | 2 |
lineage4.3 | 1 |
lineage4.8 | 1 |
lineage2.2 | 1 |
lineage4.9 | 6 |
lineage4 | 10 |
lineage4.1.2.1 | 1 |
La2 | 1 |
lineage4.3.4 | 1 |
La3 | 1 |
lineage4.5 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 98 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675465 | HR-TB | None | ERR4815604 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675236 | HR-TB | None | ERR161033 | HR-TB | None | ERR4816999 | Other | None | SRR3675234 | Other | None | SRR3675501 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR2229542 | Other | lineage4.8 | None | SRR3675574 | HR-TB | None | ERR212033 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR4818615 | Other | None | ERR4818394 | Other | lineage4.9 | None | ERR4818929 | HR-TB | None | SRR5341453 | Sensitive | None | ERR4816656 | HR-TB | None | ERR234659 | HR-TB | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4819280 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341302 | HR-TB | None | ERR2693231 | Other | None | ERR2693230 | Other | None | SRR6045555 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045526 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6046152 | Other | lineage4.9 | None | SRR6046397 | Other | None | SRR6044790 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046540 | HR-TB | None | SRR6325444 | HR-TB | None | ERR323036 | HR-TB | None | SRR6046644 | HR-TB | None | ERR294248 | HR-TB | None | ERR5311099 | HR-TB | None | ERR502532 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR5311090 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323063 | HR-TB | None | SRR7535086 | Other | None | ERR323038 | HR-TB | None | ERR323055 | HR-TB | None | ERR323041 | HR-TB | None | ERR323043 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR3283024 | Other | None | ERR3283017 | HR-TB | None | ERR3283021 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3797014 | Other | None | ERR3283032 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3445503 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797017 | Other | None | ERR3797044 | Other | None | ERR3797047 | HR-TB | lineage4 | None | ERR6359045 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR5336148 | Other | None | ERR3797061 | Other | None | ERR4407463 | HR-TB | None | ERR736835 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR736839 | Other | None | ERR736867 | HR-TB | None | SRR1169306 | Other | None | ERR736874 | HR-TB | None | SRR1169194 | Other | None | SRR1169249 | Other | La3 | None | ERR8976043 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR14801749 | Sensitive | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR19303884 | HR-TB | None |
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