lineage | Count |
---|---|
65 | |
lineage3.1 | 2 |
lineage4 | 28 |
lineage4.1.2.1 | 3 |
lineage4.9 | 12 |
lineage4.3.4 | 1 |
lineage1.1.3.1 | 1 |
lineage4.3.2 | 1 |
lineage2.2.2 | 1 |
lineage4.4.1.1 | 2 |
lineage4.1 | 2 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage3;lineage2.1 | 1 |
lineage4.1.1.3 | 1 |
lineage4.1.1 | 1 |
lineage3 | 4 |
lineage1.1 | 1 |
lineage4.1.2 | 1 |
spoligotype | Count |
---|---|
None | 129 |
ID | Drug resistance | Lineage | Country iso2 | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | ERR323045 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR323063 | HR-TB | None | ERR1034634 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR1063896 | Sensitive | None | ERR108471 | HR-TB | lineage4 | None | ERR1063859 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3445503 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797036 | HR-TB | None | ERR4188247 | HR-TB | None | ERR4024991 | Other | None | ERR4796929 | Sensitive | lineage4 | None | ERR4188350 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4797184 | Sensitive | lineage4 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6358837 | HR-TB | None | ERR6358979 | Other | None | ERR6866410 | Sensitive | None | ERR6358991 | HR-TB | None | ERR6866022 | Other | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR8976043 | HR-TB | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR736875 | HR-TB | lineage4 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | SRR10808399 | Sensitive | lineage4 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR13861372 | Other | lineage4.9 | None | SRR13837677 | Sensitive | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR13861660 | Sensitive | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR1640750 | HR-TB | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176751 | HR-TB | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR161033 | HR-TB | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675482 | HR-TB | None | SRR3675545 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | SRR3675383 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675486 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675558 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR212121 | HR-TB | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4819051 | Other | lineage4 | None | ERR3275220 | Other | lineage3 | nl | SRR5341461 | Sensitive | lineage4 | None | SRR5341453 | Sensitive | None | SRR5341300 | Other | lineage4 | None | ERR4820749 | Sensitive | lineage4.9 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR6046133 | HR-TB | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | ERR2446144 | Other | lineage3 | nl | SRR6045555 | HR-TB | None | SRR5341313 | HR-TB | None | SRR5341467 | Other | lineage4 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6325444 | HR-TB | None | SRR6325442 | HR-TB | None | ERR278594 | HR-TB | None | ERR2517528 | Other | lineage3 | nl | SRR6325447 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | ERR3077978 | Other | lineage1.1 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR323036 | HR-TB | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR5311090 | HR-TB | None | ERR294248 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR323034 | HR-TB | lineage3.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None |
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