Rv0668 - c.-980C>T
Drug resistance types
4 Sensitive
0 RR-TB
13 HR-TB
3 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
8 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 11 |
| La1.2;La1.8.1 | 1 |
| lineage2.2.1 | 1 |
| M.canetti;lineage1 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.4.1.2 | 1 |
| lineage2.2 | 1 |
| lineage4.3.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 29 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR176741 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR6046141 | Other | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None |
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