Rv0006 - c.-538C>T
Drug resistance types
53 Sensitive
0 RR-TB
16 HR-TB
0 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 2 |
| 17 | |
| lineage2.2.1 | 4 |
| lineage4.9 | 6 |
| lineage3.1.2 | 4 |
| lineage4.2.1 | 1 |
| lineage4 | 40 |
| lineage2.2 | 2 |
| lineage4.7 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.3.4 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 88 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2514929 | HR-TB | lineage1.1.2 | None | SRR5341456 | Other | None | SRR5341418 | Other | None | SRR1710075 | Sensitive | lineage2.2.1 | cn | ERR6359082 | Other | lineage4.9 | None | SRR6045503 | HR-TB | None | SAMN02599119 | Sensitive | lineage3.1.2 | in | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046824 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046802 | Other | lineage4 | None | ERR502889 | Other | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046897 | Sensitive | lineage4 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR3439432 | Other | None | SRR7496523 | Other | lineage4.7 | None | ERR133986 | HR-TB | None | ERR067681 | HR-TB | None | ERR3445504 | HR-TB | None | ERR349296 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4798406 | HR-TB | None | ERR4798431 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR21733170 | Sensitive | lineage4.1.2.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | SRR1173839 | Sensitive | lineage3.1.2 | None | SRR1173644 | Sensitive | lineage3.1.2 | None | SRR25534301 | HR-TB | lineage2.2.1.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR3675502 | Other | None | SRR6280337 | Sensitive | lineage2.2.1 | cn | SRR6280261 | Sensitive | lineage2.2.1 | cn | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR6280154 | Sensitive | lineage2.2.1 | cn | ERR158583 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR8380934 | Sensitive | lineage3.1.2 | in | SRR3675292 | Sensitive | lineage4 | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR3675550 | Other | None | ERR212001 | HR-TB | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4817998 | Other | lineage3 | None |
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