Rv3795 - c.1593C>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
25 Sensitive
0 RR-TB
29 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 35 |
| lineage4 | 2 |
| M.canetti;lineage4.9 | 4 |
| lineage2.2.1.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.9;lineage7 | 2 |
| La3;lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La1.7;lineage4.9;lineage7 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.6.2.2 | 2 |
| M.canetti;lineage1 | 1 |
| La1;lineage4.9 | 2 |
| La1.7.1;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.8 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage3 | 1 |
| lineage4.3.4 | 1 |
| 1 | |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 77 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR29096387 | Sensitive | M.canetti;lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR5341453 | Other | lineage4.9 | None | SRR29096873 | Sensitive | lineage4.9 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR176751 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR6358979 | Other | lineage4.9 | None | ERR13264981 | Sensitive | La1.7;lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR29096709 | Sensitive | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | SRR29096394 | Sensitive | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR29096530 | Sensitive | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR4816656 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4816151 | Sensitive | lineage4.8 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR29097058 | Other | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR28351347 | Other | lineage3 | None | SRR29096882 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR29096710 | Sensitive | lineage4.9 | None | ERR6358991 | HR-TB | None | SRR29049025 | Sensitive | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR29231425 | Sensitive | lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None |
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