Rv2428 - c.390G>C


Drug resistance types
19 Sensitive 2 RR-TB 38 HR-TB 9 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 15 Other
lineage Counts
lineage Count
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.9 40
lineage4.3.4 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage2.1;lineage4.9 3
La1.7.1;La1.7.X-unk4 1
lineage4.2;lineage4.8.1;lineage4.9 1
La1.7.1;lineage4.9 1
lineage2.2.1.2 1
La1;lineage4.9 1
lineage4.9;lineage7 1
lineage2.2 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.1.2.1 1
lineage4.2;lineage4.9 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9 6
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage4.1.1.3 1
La3;lineage4.3.4 1
M.canetti;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.2.1 1
M.canetti;lineage2.1;lineage6.3 1
La1.7;M.canetti;lineage4.9 1
lineage2.2.1.2;lineage7 1
M.canetti;lineage4.9;lineage9 1
La1.7.X-unk4;lineage4.9 1
lineage3 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
M.canetti;lineage2.1 1
spoligotype Counts
spoligotype Count
None 83
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR736875 HR-TB lineage4.9 None
ERR926165 Sensitive lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR9119669 HR-TB lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR6045548 Sensitive lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR926160 Sensitive lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR161037 Other lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
SRR21689947 Sensitive lineage2.2.1.2 None
ERR926154 Sensitive lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4799513 HR-TB lineage2.2 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR20632814 Sensitive lineage4.9 None
SRR1162864 Other lineage4.1.2.1 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR926157 Sensitive lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR926163 Other lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR926159 Sensitive lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR8217918 HR-TB lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926156 Sensitive lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR4769439 HR-TB lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR6359066 HR-TB lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR26399490 Sensitive lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4816470 HR-TB lineage3 None
ERR4769450 Other lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR1063862 HR-TB lineage4.9 None
ERR323037 Other lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR926164 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR3797046 HR-TB lineage4.9 None
ERR779852 Sensitive lineage4.9 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR736831 Other lineage4.9 None