Rv0001 - c.996A>G


Drug resistance types
4 Sensitive 3 RR-TB 32 HR-TB 20 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 61 Other
lineage Counts
lineage Count
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage2.1;lineage4.9 8
lineage4.1.1.1 2
12
lineage4.9 29
La3;lineage4.9 3
lineage2.1;lineage6.3 2
lineage4 2
La2;lineage4.9 2
lineage4.9;lineage9 1
lineage4.1.3 2
lineage3.1.2.2 1
lineage4.9;lineage6.3 4
lineage4.1.2.1 4
La1.7.1;lineage4.9 1
La1;lineage4.9 1
La3;lineage4.8 2
lineage4.6.2.2 1
lineage6.3.1 1
lineage2.1;lineage4.9;lineage6.3 4
La2;lineage2.2 1
lineage3 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1;lineage2;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.4.1.1 1
La1.7;M.canetti;lineage4.9 2
lineage1;lineage4.9 1
La3;lineage4.3.4 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.3.2;lineage4.9 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage6.1.3 1
lineage1.1.3.1 1
lineage2.2.1 5
lineage2.2 1
lineage4.3.4 1
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
M.canetti;lineage4.9 2
La1.7.1;La1.7.X-unk4 1
lineage1.2.2.2 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.3.2 1
La2;lineage4.9;lineage9 1
lineage4.2.1 1
lineage4.8.1 1
lineage4.2;lineage4.9 1
lineage2.1 1
M.canetti;lineage2.1;lineage6.3 1
spoligotype Counts
spoligotype Count
None 121
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR7496509 Other None
SRR18213713 HR-TB None
ERR4816999 Other None
ERR6358979 HR-TB lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR3675275 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283044 Other lineage4 None
SRR6045555 Other lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR16156817 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR176793 Other lineage4.1.1.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
ERR1063858 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR7131023 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
ERR9786671 Other None
SRR7496517 Other None
ERR9787197 Other None
SRR3675236 Other None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
ERR9787139 Other lineage6.3.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR3797069 Other lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR4798504 RR-TB lineage3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR3675232 Other lineage4.1.2.1 None
SRR6046066 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR6046133 HR-TB lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR1063862 HR-TB lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR176751 HR-TB lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR9787165 Other lineage6.1.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR181824 MDR-TB lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR9786604 Other None
ERR9117709 Other None
SRR6789626 Other None
SRR28351584 HR-TB lineage2.2.1 None
ERR987722 MDR-TB None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4810624 MDR-TB lineage2.2 None
ERR736817 HR-TB lineage4.3.4 None
ERR2693252 HR-TB lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4816466 HR-TB lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR18500604 Sensitive lineage2.2.1 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR7496472 Other lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR181744 HR-TB La3;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR473332 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR3283040 HR-TB lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR4797588 MDR-TB lineage3 None