Rv0001 - c.996A>G


Drug resistance types
4 Sensitive 3 RR-TB 32 HR-TB 20 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 61 Other
lineage Counts
lineage Count
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.1;lineage4.9 8
La3;lineage4.8 2
M.canetti;lineage2.1;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.1.1.1 2
12
lineage2.2.1 5
lineage2.1;lineage6.3 2
lineage4.9 29
La1;lineage2;lineage4.9 1
lineage4.9;lineage6.3 4
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4 2
lineage4.4.1.1 1
La1.7;M.canetti;lineage4.9 2
M.canetti;lineage4.9 2
lineage1;lineage4.9 1
La3;lineage4.3.4 1
La1.7.1;La1.7.X-unk4 1
lineage1.2.2.2 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 4
lineage4.2.1 1
lineage3 2
lineage6.1.3 1
lineage4.6.2.2 1
lineage1.1.3.1 1
lineage2.2 1
lineage4.3.4 1
La2;lineage2.2 1
La3;lineage4.9 3
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La2;lineage4.9 2
lineage4.1.2.1 4
lineage4.3.2;lineage4.9 1
La1;lineage4.9 1
lineage4.1.3 2
lineage4.8.1 1
lineage4.2;lineage4.9 1
lineage2.1 1
lineage6.3.1 1
lineage4.9;lineage9 1
lineage3.1.2.2 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.3.2 1
La2;lineage4.9;lineage9 1
La1.7.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 121
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR7496509 Other None
SRR28351584 HR-TB lineage2.2.1 None
ERR987722 MDR-TB None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR1180226 HR-TB lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR6046066 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR6046133 HR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR18500604 Sensitive lineage2.2.1 None
ERR1063849 HR-TB lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR7496472 Other lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR19295647 HR-TB lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR9787165 Other lineage6.1.3 None
SRR6045892 Sensitive lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR181824 MDR-TB lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR9786604 Other None
ERR9117709 Other None
SRR6789626 Other None
SRR18213713 HR-TB None
ERR4816999 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4810624 MDR-TB lineage2.2 None
ERR736817 HR-TB lineage4.3.4 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR26399973 Other La3;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR323115 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
ERR4769521 RR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR3675221 Other lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR176751 HR-TB lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR133825 HR-TB La1;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR473332 Other lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR7131023 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
ERR9786671 Other None
SRR7496517 Other None
ERR9787197 Other None
SRR3675236 Other None
ERR6358979 HR-TB lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4798504 RR-TB lineage3 None
ERR4816466 HR-TB lineage4.9 None
ERR3283044 Other lineage4 None
SRR6045555 Other lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR6045219 HR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR1063862 HR-TB lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR9117805 Other lineage4.3.2 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR9786421 Other lineage4.1.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None