Rv0668 - c.3562_3564delGCAinsAC
Drug resistance types
3 Sensitive
0 RR-TB
35 HR-TB
3 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
26 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 34 |
| lineage2.2.1 | 5 |
| La1.7;lineage4.9;lineage7 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La3;lineage4.9 | 4 |
| lineage4.1.2.1 | 2 |
| lineage4.9;lineage7 | 2 |
| lineage4.8 | 2 |
| La1;lineage4.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2 | 3 |
| lineage1;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| La1.7;lineage4.9 | 3 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4 | 1 |
| La1.7.1 | 1 |
| La1;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La1.7.1;lineage4.9 | 1 |
| 1 | |
| lineage4.1.1.2 | 1 |
| lineage4.3.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 70 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2693252 | HR-TB | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR6045548 | Other | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR4769452 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR6046046 | Other | lineage4.9 | None | SRR10808668 | Other | lineage2.2.1 | None | SRR3675270 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR6045347 | Other | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR1063896 | HR-TB | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR5341330 | Other | lineage4.9 | None |
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