Rv0006 - c.-128C>T
Drug resistance types
5 Sensitive
0 RR-TB
11 HR-TB
7 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 2 |
| lineage4.9;lineage9 | 2 |
| lineage4.9 | 5 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| lineage4.4.2 | 1 |
| M.canetti;lineage4.9 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage2.2.1 | 1 |
| La2;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage3.1.2.2 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 26 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2512474 | Sensitive | lineage1.1.2 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR7070608 | Sensitive | lineage1.1.2 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR15316135 | Sensitive | lineage4.4.2 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR15368849 | Sensitive | lineage2.2.1 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR987722 | MDR-TB | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None |
|---|
