Rv0486 - c.517T>C


Drug resistance types
88 Sensitive 4 RR-TB 191 HR-TB 24 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 115 Other
lineage Counts
lineage Count
180
lineage4 72
lineage4.3.4 2
lineage4.9 55
lineage2.2 10
lineage4.3.2 1
lineage1.1.2 3
lineage5.2 2
lineage4.1.2.1 12
lineage4.6.2.2 2
lineage6 1
lineage3 7
lineage6.1.3 1
lineage3.1.2.2;lineage3.1.2.1 1
lineage2.2.2 2
lineage2.2.1 23
La3 1
lineage2.2.1.2 2
lineage4.4.1.1 3
lineage4.3.3 1
lineage2.2.1.1 4
lineage4.9;lineage2.2 1
lineage4.4.1.1.1 1
lineage2 3
lineage3.1 3
lineage4.3.4.1 2
lineage4.2.1 1
La1.8.1 3
lineage2.1 3
lineage7;lineage2.2.1.2 1
lineage6.3;lineage4.9;lineage2.1 1
lineage4.1 1
lineage4.3.4.2.1 4
lineage3;lineage2.1 1
lineage4.3 1
lineage4.1.1.3 1
lineage4;lineage1.1.2 1
lineage4.1.1 1
lineage4.1.1.2 1
lineage4.1.2 3
lineage4.8 2
lineage4.9;lineage2.1 1
lineage1.1 1
La2 1
lineage4.3.2.1 1
lineage4.4.1.2 1
La1 2
lineage4;lineage3.1 1
La1.2 1
lineage1.2.2.2 1
lineage3.1.2 1
lineage4.6.1.1 1
spoligotype Counts
spoligotype Count
None 432
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR6866022 Other None
ERR6866547 Sensitive lineage4 None
ERR6866639 Other None
ERR736848 HR-TB None
ERR736817 HR-TB lineage4.3.4 None
ERR736834 Sensitive lineage4 None
ERR736839 Other None
ERR6866807 HR-TB lineage4 None
ERR702404 HR-TB None
ERR702406 HR-TB None
ERR736831 HR-TB lineage4.9 None
ERR736867 HR-TB None
ERR736865 HR-TB None
ERR736856 HR-TB lineage4 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR736872 Sensitive lineage4 None
ERR751326 Sensitive lineage4 None
ERR736875 HR-TB lineage4 None
ERR772255 MDR-TB lineage4.3.2 None
ERR9634265 Sensitive None
SRR21733183 RR-TB lineage1.1.2 None
ERR8976043 HR-TB None
ERR9119500 MDR-TB lineage5.2 None
ERR9119669 HR-TB None
ERR9786671 Other None
ERR9786421 Other lineage4.1.2.1 None
ERR9786604 Other None
ERR9786601 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR9787165 Other lineage6 None
ERR9896144 Other lineage3 None
ERR9787197 Other None
ERR9787256 Other lineage6.1.3 None
ERR987722 HR-TB None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
SRR10808805 Sensitive None
SRR069978 Pre-XDR-TB lineage2.2.2 None
SRR069981 HR-TB lineage2.2.2 None
SRR10315567 Other lineage2.2.1 None
SRR10809074 Sensitive lineage4 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1158918 Sensitive lineage4 None
SRR1162740 Other lineage4.1.2.1 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1169306 Other None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1167384 Other lineage4 None
SRR1169249 Other La3 None
SRR1172857 MDR-TB None
SRR1172728 MDR-TB None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1172146 Sensitive lineage4.9 None
SRR1172310 HR-TB None
SRR1172817 HR-TB None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1172951 Other None
SRR1173363 HR-TB None
SRR1173118 Other None
SRR1173153 HR-TB None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173629 Other None
SRR1173400 Other None
SRR1173453 Other lineage4.4.1.1 None
SRR1173568 Other lineage4.9 None
SRR1173384 Other lineage4 None
SRR1173562 HR-TB lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1175090 Other lineage4.9 None
SRR1173706 Other lineage4.9 None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1174897 HR-TB None
SRR1173777 Other lineage4 None
SRR1173778 Other None
SRR1173788 Other None
SRR1175074 MDR-TB None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1175512 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR1180172 Other lineage2.2.1 None
SRR1180250 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180420 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181091 Other lineage2.2.1.1 None
SRR1180977 Sensitive lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR1181325 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181402 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1183054 Sensitive lineage4.9 None
SRR1183106 Other lineage2.2.1.1 None
SRR1184294 HR-TB None
SRR1183144 Other lineage2.2.1 None
SRR1184024 Other lineage2.2.1.1 None
SRR1183145 Other lineage2.2.1 None
SRR1183965 Sensitive lineage4.9 None
SRR1184381 MDR-TB None
SRR1184346 HR-TB lineage3.1 None
SRR1184372 MDR-TB None
SRR1184312 HR-TB lineage2.2.1 None
SRR1196546 HR-TB None
SRR1184380 HR-TB None
SRR1184388 Other None
SRR1196494 MDR-TB None
SRR1196566 HR-TB None
SRR1196768 MDR-TB None
SRR1196677 HR-TB lineage2 None
SRR1640750 HR-TB None
SRR12142339 HR-TB lineage2.2.1 None
SRR12416824 HR-TB None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR14782405 HR-TB None
SRR14801749 Sensitive None
SRR14802079 MDR-TB lineage4.2.1 None
SRR12416840 MDR-TB lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
SRR15368973 Other None
SRR1791747 Other La1.8.1 None
SRR1710057 Other lineage2.1 None
SRR17658565 Other lineage3 None
SRR20969708 HR-TB lineage2.2 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR20969731 Other lineage2.2.1 None
SRR18910194 HR-TB lineage2.2 None
SRR19295647 Sensitive lineage4.9 None
SRR19304036 HR-TB None
SRR20970016 Other lineage2.2 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR8692790 RR-TB lineage4 None
SRR26399239 Sensitive lineage4.9 None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
SRR26399490 Sensitive lineage4.9 None
SRR3675464 HR-TB lineage4.1 None
ERR176778 HR-TB None
ERR161039 Sensitive lineage4.3.4 None
SRR6325445 HR-TB None
ERR1035239 HR-TB None
SRR3675482 HR-TB None
ERR161033 HR-TB None
ERR176779 HR-TB None
ERR161034 Other lineage4.3.4.2.1 None
SRR3675486 HR-TB None
SRR3416776 Other lineage2.1 None
ERR702405 Sensitive lineage2.1 None
ERR4814536 MDR-TB lineage3;lineage2.1 None
ERR181744 HR-TB None
SRR3675246 Sensitive lineage4 None
SRR3675234 Other None
ERR176568 Other lineage4.3 None
SRR3675265 Other lineage4 None
SRR3675270 HR-TB None
SRR3675312 HR-TB lineage4 None
SRR3675284 HR-TB lineage4.9 None
ERR176643 HR-TB None
SRR3675280 HR-TB lineage4.9 None
ERR181887 HR-TB None
ERR176651 HR-TB None
ERR176751 HR-TB None
ERR176740 HR-TB None
SRR3675383 HR-TB None
SRR3675456 HR-TB None
SRR3675510 Other None
ERR212001 HR-TB None
SRR3675545 HR-TB None
ERR212033 HR-TB None
SRR3675574 HR-TB None
ERR212123 Other None
ERR212034 HR-TB None
SRR3675555 HR-TB None
SRR3675558 HR-TB None
ERR212125 HR-TB lineage4 None
ERR4816466 HR-TB None
ERR212121 HR-TB None
ERR4816656 HR-TB None
SRR3675571 HR-TB None
SRR5341384 Sensitive lineage4.9 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR4818110 Sensitive lineage4.9 None
ERR2229143 Other lineage4.1.1 None
ERR234659 HR-TB None
SRR5341387 Other lineage4 None
ERR4818252 Other lineage4.1.1.2 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4818347 Other lineage4.1.2 None
ERR4819051 Other lineage4 None
ERR4818394 Other lineage4.9 None
ERR4818929 HR-TB None
SRR5341453 Sensitive None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341396 Other lineage4 None
SRR5341456 Other None
ERR1035138 MDR-TB None
ERR2514327 HR-TB lineage4.8 None
SRR5341425 Other lineage4 None
SRR5341455 Sensitive lineage4 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341298 Sensitive lineage4 None
SRR5341300 Other lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341308 Sensitive lineage4 None
ERR2514692 Other None
SRR5341303 RR-TB lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR5341333 HR-TB None
SRR5341461 Sensitive lineage4 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341366 Sensitive lineage4 None
SRR5341467 Other lineage4 None
SRR5341310 Other lineage1.1.2 None
SRR5341323 Sensitive lineage4 None
ERR6359082 Other lineage4.9 None
SRR5341330 HR-TB None
ERR2693231 Other None
ERR502511 Sensitive lineage4.9;lineage2.1 None
SRR5341469 Other lineage4 None
SRR5341470 HR-TB None
ERR4821053 Other lineage3 None
ERR2693239 HR-TB None
ERR2693230 Other None
ERR2693254 Other None
ERR2693257 Other None
ERR278594 HR-TB None
SRR5535933 HR-TB None
SRR6045503 HR-TB None
SRR6045526 HR-TB None
SRR6045706 Sensitive lineage4 None
ERR2693227 Other lineage4.9 None
ERR4821655 Sensitive lineage4 None
SRR6045555 HR-TB None
SRR6045795 HR-TB lineage2.2.1 None
SRR6046133 HR-TB None
SRR6044790 HR-TB None
SRR6044780 Other lineage4.9 None
SRR6044835 Sensitive lineage4 None
SRR6044838 Other lineage4.9 None
SRR6044875 HR-TB lineage4.9 None
SRR6045952 HR-TB None
SRR6044876 Sensitive lineage4 None
SRR6044890 Other lineage4.9 None
SRR6045217 Other lineage4 None
SRR6045191 Sensitive lineage4.9 None
SRR6045053 Other None
SRR6045399 Other None
SRR6046210 Other lineage4 None
SRR6045327 HR-TB None
SRR6045233 HR-TB None
SRR6046046 Other None
SRR6046259 Sensitive lineage4.9 None
SRR6046225 HR-TB None
SRR6046253 HR-TB lineage4.9 None
SRR6046299 HR-TB None
SRR6046397 Other None
SRR6325444 HR-TB None
SRR6046362 HR-TB None
SRR6046382 HR-TB lineage2.2.1 None
SRR6046460 HR-TB None
SRR6046514 HR-TB None
SRR6325448 HR-TB None
SRR6046492 Other None
SRR6325447 HR-TB None
SRR6046594 HR-TB lineage4 None
SRR6046644 HR-TB None
SRR6046878 HR-TB lineage4 None
ERR11466072 Sensitive lineage4.3.4.2.1 None
SRR6511621 HR-TB None
SRR6325442 HR-TB None
SRR6046897 Sensitive lineage4 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6397654 HR-TB lineage4.1.2.1 None
ERR3077978 Other lineage1.1 None
ERR323037 HR-TB lineage4 None
ERR323034 HR-TB lineage3.1 None
ERR4872094 MDR-TB lineage5.2 None
ERR4831117 HR-TB None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831546 HR-TB lineage2.2 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR294248 HR-TB None
ERR323036 HR-TB None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR294266 HR-TB None
ERR5311090 HR-TB None
ERR502524 HR-TB La2 None
ERR5311081 HR-TB None
ERR502510 Sensitive lineage4 None
ERR502532 HR-TB None
ERR5311099 HR-TB None
ERR323038 HR-TB None
SRR8217918 HR-TB None
SRR9970980 Other lineage4.1.2 None
ERR323045 HR-TB None
SRR7535082 Sensitive lineage4 None
SRR7535086 Other None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9970979 Sensitive lineage4.8 None
SRR9971114 Other lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
ERR323039 HR-TB None
ERR323041 HR-TB None
ERR323055 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323053 HR-TB None
ERR323066 Sensitive lineage4 None
ERR323063 HR-TB None
ERR323056 HR-TB lineage4.4.1.2 None
ERR1035122 Sensitive None
ERR323085 Sensitive lineage4 None
ERR323107 Other lineage4 None
ERR1034634 HR-TB None
ERR067699 HR-TB lineage4 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1023525 HR-TB lineage4 None
ERR1035157 Other lineage4.9 None
ERR1063859 HR-TB None
ERR1063839 HR-TB lineage2.2 None
ERR1063855 Other lineage4 None
ERR1063857 HR-TB None
ERR1063896 Sensitive None
ERR1063883 Sensitive lineage4 None
ERR323115 Sensitive lineage4 None
ERR108471 HR-TB lineage4 None
ERR137286 Sensitive lineage4 None
ERR133825 Sensitive lineage4 None
ERR3283017 HR-TB None
ERR3273109 MDR-TB lineage4 None
ERR3283010 Other La1 None
ERR3283014 HR-TB None
ERR3283021 HR-TB None
ERR3283025 HR-TB None
ERR3283024 Other None
ERR3283028 Other None
ERR3468544 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283032 HR-TB None
ERR3283031 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3283057 HR-TB lineage4 None
ERR3445504 HR-TB None
ERR3445503 HR-TB None
ERR3283040 HR-TB None
ERR3283047 HR-TB None
ERR3445501 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3797010 Sensitive lineage4.9 None
ERR3797036 HR-TB None
ERR3797016 HR-TB None
ERR3797017 Other None
ERR3797015 HR-TB None
ERR3797014 Other None
ERR3797044 Other None
ERR3797047 HR-TB lineage4 None
ERR3797048 HR-TB None
ERR3797063 HR-TB None
ERR3797065 MDR-TB lineage4 None
ERR3797060 Other La1.8.1 None
ERR3797061 Other None
ERR3797081 Sensitive lineage4 None
ERR3797079 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR3797082 Other lineage4.9 None
ERR3797073 HR-TB La1.8.1 None
ERR3797083 HR-TB None
ERR3797087 Sensitive lineage4 None
ERR3797086 Other lineage4.9 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR387051 HR-TB None
ERR4024991 Other None
ERR405209 Sensitive lineage4 None
ERR4188350 HR-TB None
ERR4188247 HR-TB None
ERR4769452 HR-TB None
ERR4596910 Sensitive lineage4 None
ERR473332 Other lineage4 None
ERR473334 HR-TB lineage4.9 None
ERR473323 HR-TB lineage4.9 None
ERR4769497 HR-TB La1.2 None
ERR4769450 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4769521 HR-TB None
ERR4796254 Sensitive lineage4 None
ERR4796929 Sensitive lineage4 None
ERR4797184 Sensitive lineage4 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4797201 Other lineage1.2.2.2 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4797588 MDR-TB lineage3 None
ERR4797474 Other None
ERR4797264 Sensitive None
ERR4798099 Other None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4798262 HR-TB La1 None
ERR4798431 HR-TB None
ERR4799025 Pre-XDR-TB None
ERR4798504 Other lineage3 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4799378 Sensitive lineage4 None
ERR4799513 HR-TB lineage2.2 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR6358837 HR-TB None
ERR4800341 Other lineage3 None
ERR4810624 HR-TB lineage2.2 None
ERR4810741 HR-TB None
ERR4800527 MDR-TB lineage2.2.1 None
ERR4811493 HR-TB None
ERR6358755 Other lineage4.6.1.1 None
ERR6358991 HR-TB None
ERR6358979 Other None