Rv3246c - c.574_576delAGGinsCT
Drug resistance types
16 Sensitive
2 RR-TB
56 HR-TB
10 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
26 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.1.1 | 1 |
| lineage4.9 | 72 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage2.2.1 | 4 |
| La1.7;lineage4.9 | 5 |
| La1.7.1;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage3 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4 | 1 |
| lineage2.2 | 1 |
| lineage4.3.4 | 1 |
| La1.7.1 | 1 |
| lineage4.1.2 | 1 |
| La1.7;lineage4.9;lineage7 | 2 |
| La1;lineage2;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.3.2.1 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| 1 | |
| La1.6;lineage4 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 112 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR26399491 | Sensitive | lineage1.1.1.1 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR926160 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR137286 | Other | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR926156 | Other | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | SRR10809074 | HR-TB | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | SRR26399255 | Sensitive | lineage2.2.1 | None | ERR751326 | Other | lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR5341453 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR502510 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR971389 | Other | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR212001 | HR-TB | None | SRR28351554 | Other | La1.6;lineage4 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR6358979 | HR-TB | lineage4.9 | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR176651 | Other | lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR13423649 | Other | lineage2.2.1 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR926165 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None |
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