lineage | Count |
---|---|
lineage2.2.1.1 | 4 |
lineage2.2.1 | 9 |
La1.8.1 | 1 |
lineage1.2.2.1 | 10 |
lineage4.9 | 7 |
25 | |
lineage4 | 16 |
lineage4.3.4.2.1 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage3.1.3 | 1 |
lineage5.2 | 2 |
lineage2.1 | 1 |
lineage4.1.2 | 2 |
lineage4.1 | 1 |
lineage4.8 | 1 |
lineage4.3.3 | 1 |
lineage4.3.2.1 | 1 |
lineage4.1.2.1 | 2 |
lineage1.1.2 | 1 |
lineage2.2.1.2 | 1 |
lineage2.2 | 1 |
lineage3.1.2.1 | 1 |
lineage4.3.4 | 1 |
lineage1.1.3.1 | 1 |
spoligotype | Count |
---|---|
None | 92 |
ID | Drug resistance | Lineage | Country iso2 | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR12882041 | Sensitive | lineage1.2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR176651 | HR-TB | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR4819051 | Other | lineage4 | None | ERR11049217 | Sensitive | lineage1.2.2.1 | None | ERR181887 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR3675571 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR5341453 | Sensitive | None | SRR6046397 | Other | None | ERR11049292 | Sensitive | lineage1.2.2.1 | None | SRR6045010 | Other | lineage4 | None | SRR6511621 | HR-TB | None | ERR4829362 | Sensitive | lineage1.2.2.1 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR7131273 | Sensitive | lineage1.2.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR11049036 | Sensitive | lineage1.2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323045 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063896 | Sensitive | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063859 | HR-TB | None | ERR11044428 | Sensitive | lineage1.2.2.1 | None | ERR11044903 | Sensitive | lineage1.2.2.1 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR2513197 | Sensitive | lineage1.2.2.1 | gb | ERR3283025 | HR-TB | None | ERR3283041 | Other | lineage4.9 | None | ERR3797086 | Other | lineage4.9 | None | ERR3445503 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4024991 | Other | None | ERR4769474 | HR-TB | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4798099 | Other | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR6866410 | Sensitive | None | ERR6358979 | Other | None | ERR6866022 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | ERR9634265 | Sensitive | None | ERR11049977 | Sensitive | lineage1.2.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | SRR10808805 | Sensitive | None | SRR10315567 | Other | lineage2.2.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR10809074 | Sensitive | lineage4 | None |
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