Rv0668 - c.61_63delAGGinsCT
Drug resistance types
4 Sensitive
2 RR-TB
19 HR-TB
6 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 24 |
| La1.7;lineage4.9 | 2 |
| lineage2.2 | 1 |
| lineage4.3.4 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage2.2.1 | 4 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage4.1.2.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 49 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR137286 | Other | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR400345 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR3273109 | HR-TB | lineage4 | None | ERR751326 | Other | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675246 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None |
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