lineage | Count |
---|---|
68 | |
lineage4.3.4 | 1 |
lineage4 | 4 |
lineage2.2 | 3 |
lineage3.1 | 1 |
lineage2 | 2 |
lineage1.2.1.2 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage2.2.1 | 2 |
lineage4.3 | 1 |
lineage4.9 | 4 |
lineage2.2.1.1 | 1 |
La1 | 1 |
spoligotype | Count |
---|---|
None | 90 |
ID | Drug resistance | Lineage | Country iso2 | ERR4188350 | HR-TB | None | ERR5336148 | Other | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811493 | HR-TB | None | ERR6358837 | HR-TB | None | ERR736874 | HR-TB | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736839 | Other | None | ERR736867 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR9119669 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8976043 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1169194 | Other | None | SRR1169306 | Other | None | SRR1172951 | Other | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1173788 | Other | None | SRR1173118 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173629 | Other | None | SRR1184380 | HR-TB | None | SRR1184294 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184388 | Other | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR12416824 | HR-TB | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR12142341 | HR-TB | None | SRR15368973 | Other | None | SRR19304036 | HR-TB | None | SRR19303884 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR176779 | HR-TB | None | ERR176778 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR181887 | HR-TB | None | ERR176651 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | ERR212033 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675574 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR3742665 | HR-TB | None | ERR4818615 | Other | None | ERR234659 | HR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | SRR6045526 | HR-TB | None | SRR5341302 | HR-TB | None | ERR2693239 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6045327 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046397 | Other | None | SRR6325444 | HR-TB | None | SRR6325448 | HR-TB | None | ERR5311090 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR323043 | HR-TB | None | ERR502532 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR1063862 | HR-TB | None | ERR323045 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797069 | Other | None | ERR3797086 | Other | lineage4.9 | None |
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