Rv0006 - c.382A>C
Drug resistance types
14 Sensitive
2 RR-TB
81 HR-TB
9 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
33 Other
lineage Counts
| lineage | Count |
|---|---|
| 65 | |
| lineage4 | 12 |
| lineage3;lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage4.9 | 17 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1.1 | 1 |
| lineage3 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.2.1 | 5 |
| lineage2.2.1 | 6 |
| lineage1.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage2.2 | 5 |
| lineage3.1 | 2 |
| lineage4.3.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| La1.8.1 | 2 |
| lineage4.3.2 | 1 |
| lineage4.3.4 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.8;lineage4.1 | 2 |
| La3 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.4.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 141 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675486 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675501 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR176651 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR181887 | HR-TB | None | SRR3675270 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675510 | Other | None | SRR3675545 | HR-TB | None | ERR4816976 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675570 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4 | None | ERR212001 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816656 | HR-TB | None | ERR4818929 | HR-TB | None | ERR234659 | HR-TB | None | ERR2229143 | Other | lineage4.1.1 | None | SRR6045952 | HR-TB | None | SRR5341330 | HR-TB | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | ERR278594 | HR-TB | None | SRR5341418 | Other | None | ERR2660539 | Other | lineage4.9 | None | ERR2679270 | HR-TB | lineage4.1.2 | None | ERR4821578 | Other | lineage4.1.2.1 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045217 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6046225 | HR-TB | None | SRR6046046 | Other | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6325444 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR294248 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | SRR6831950 | Other | lineage4.3.3 | None | ERR323038 | HR-TB | None | ERR323036 | HR-TB | None | ERR5311099 | HR-TB | None | ERR294266 | HR-TB | None | ERR5311081 | HR-TB | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR323041 | HR-TB | None | ERR323045 | HR-TB | None | ERR323055 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063862 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3797083 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283017 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3468544 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4188350 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR405209 | Sensitive | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6358979 | Other | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR6358837 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736839 | Other | None | ERR736875 | HR-TB | lineage4 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8976043 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR1169306 | Other | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786843 | Other | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR13861266 | Sensitive | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR13861146 | Sensitive | lineage4.9 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861332 | Other | lineage4.9 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861534 | Other | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR19324818 | Sensitive | lineage1.1.1.1 | None | SRR1791696 | Other | La1.8.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR26399239 | Sensitive | lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR1035239 | HR-TB | None | ERR161033 | HR-TB | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR6325445 | HR-TB | None | SRR3675482 | HR-TB | None |
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