Rv0005 - p.Ser322Ala
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
38 Sensitive
3 RR-TB
29 HR-TB
6 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 51 |
| lineage4.4.1.1.1 | 1 |
| La3;lineage4 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| La2;lineage2.2 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage4.9;lineage7 | 2 |
| lineage2.1;lineage4.9 | 2 |
| La2;lineage4.9 | 1 |
| La3;lineage4.9 | 10 |
| lineage2.2.1 | 4 |
| 1 | |
| La1.7;lineage4.9 | 5 |
| lineage4 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.1.2.1 | 2 |
| lineage4.3.4 | 2 |
| lineage2.2.1;lineage4 | 2 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage3 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La1.8.1 | 2 |
| lineage4.9;lineage9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 103 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1175513 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR3283028 | Other | La3;lineage4 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR6046210 | Other | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR6358991 | HR-TB | None | SRR29231479 | RR-TB | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR363445 | Other | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR736831 | Other | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR387051 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR11662694 | Other | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR161037 | Other | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR212138 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR29017081 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR181824 | HR-TB | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | ERR3797067 | Other | La1.8.1 | None | ERR3797019 | Other | La1.8.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None |
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