Rv3696c - c.1080T>C


Drug resistance types
13 Sensitive 8 RR-TB 60 HR-TB 12 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 51 Other
lineage Counts
lineage Count
La1;lineage4.9 3
lineage4.9 68
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 3
lineage2.2.1 7
La1.6;La3;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1;lineage2;lineage4.9 1
lineage4.3.1;lineage4.9;lineage6 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La1.7;M.canetti;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La3;lineage4 1
La1.7;lineage4.9 4
lineage1.1.3.1 1
lineage4 2
1
La1.6;lineage4 1
La1.7;lineage4.9;lineage6 1
lineage1.1.2 1
lineage2.2 3
La3;lineage4.9 8
lineage4.9;lineage6.1.3 1
lineage4.3.2.1 1
lineage2.2.1.2;lineage7 1
lineage4.9;lineage7 5
La1.8.1 3
La1.7 2
lineage4.2;lineage4.6.3;lineage4.9 1
lineage2.1;lineage4.9;lineage7 1
lineage4.3.4 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.1.2 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.8 1
lineage2.1;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.3.4.2.1 2
La1;lineage4.1.2 1
lineage4.2;lineage4.9 1
lineage4.4.1.2 1
spoligotype Counts
spoligotype Count
None 145
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4769497 Other La1;lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR26399490 Sensitive lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR323066 HR-TB lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR10315567 HR-TB lineage2.2.1 None
SRR6046382 RR-TB lineage2.2.1 None
ERR2446566 Other lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
ERR751326 Other lineage4.9 None
ERR4796254 Other lineage4.9 None
SRR5341453 Other lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR14782405 HR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4796929 Sensitive lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR108125 RR-TB lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR6045053 Other lineage4 None
ERR1063896 HR-TB None
SRR28351339 MDR-TB lineage4 None
SRR28351554 Other La1.6;lineage4 None
ERR137286 Other lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR736872 HR-TB lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR702405 HR-TB lineage4.9 None
SRR12199437 Sensitive lineage1.1.2 None
SRR6045217 Other lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
ERR3283031 Other La3;lineage4.9 None
ERR736848 Other lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR3675267 Other La1.7;lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR1035122 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR3445502 HR-TB lineage4.9;lineage7 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR3797081 Sensitive lineage4.9 None
ERR3797073 Other La1.8.1 None
ERR3797064 Other La3;lineage4.9 None
ERR4830353 HR-TB La1.7 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR473332 Other lineage4.9 None
ERR3797086 Sensitive lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR6358979 HR-TB lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR20632814 Sensitive lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR6046046 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR1791747 Other La1.8.1 None
ERR6866639 HR-TB lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR10315466 RR-TB lineage2.2.1 None
ERR3797015 HR-TB lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR387051 RR-TB lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR6045548 Other lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4799025 Other lineage4.8 None
SRR14782054 Other lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR3675235 HR-TB lineage4.9 None
ERR11465015 Sensitive lineage4.3.4.2.1 None
ERR3283014 Other La3;lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
ERR3283010 Sensitive La1.8.1 None
ERR133825 HR-TB La1;lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
SRR3675222 Other La1.7 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR502510 HR-TB lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR502511 HR-TB lineage4.9 None